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@daler daler commented Jul 21, 2025

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b-full and others added 6 commits November 8, 2024 11:40
Added a helper function that recursively searches the directory
structure and returns the path to the top level directory in an lcdb-wf repo
-Implemented changes to account for 'LibraryLayout', 'Layout' and
'layout' formats in sampletable.
-Refactored the test suite and added pytest tests to check for correctness
Changed import statement for helpers package that was causing an error
Improve the way the layout column is checked and remove the test
parameter and functionality in load_config as it has become clear that implementing unit
tests will require its own issues and resolutions
Make sure the table is in fact an SRA sampletable before checking the
layout
Account for different 'layout's in sampletable
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3 participants