This folder contains information about the pipelines used in the manuscript "Genome - nuclear lamina interactions are multivalent and cooperative" by Dauban et al.. Are detailed pipelines to:
- process tagmentation data
- process pA-DamID data
- generate domainograms
The Figure folder contains scripts used to generate figures.
For the sake of clarity we simplified the recombination nomenclature in the manuscript. Because different names were used in raw and processed data, we link here the names used in the raw and processed data to those used in the manuscript.
- T201h179 —> d1
- T201h44 —> d2
- T20165 —> d3
- T201162 —> d4
- T20124 —> d5
- T48h20 —> d6
- T48h81 —> i10
- T3h153 —> i12
- T3 —> d11
- T201h49 —> i7
- T201h143 —> i9
- T201h51 —> i8
- II -> R4-5 deletion by CRISPR
- pool3 -> R4-5 isolation in an iLAD environment
- pool4 -> R2-3 isolation in an iLAD environment
- pool7 -> R4-5 isolation close to LAD4
- pool8 -> R2-3 isolation close to LAD4
- pool5 -> t1
- pool6 -> t2
- pool1 -> t3
- pool2 -> t4
- pool3 -> t5
- pool4 -> t6