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fix(backend): spool released exports safely#6926

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fix/get-released-data-single-pass-spool
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fix(backend): spool released exports safely#6926
clonder wants to merge 1 commit into
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fix/get-released-data-single-pass-spool

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@clonder

@clonder clonder commented Jul 20, 2026

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materialize each released-data export from a single successful run of the released-record stream. count records while writing the temporary file so X-Total-Records matches the served bytes and the database transaction closes before network transfer begins.

because the backend now prepares the complete export before sending the first byte, increased the read timeouts for the bundled SILO and CLI clients and configure bounded spool storage in the deployment.

Resolves #5198
Related to #3511

🚀 Preview: https://fix-get-released-data-sin.loculus.org

Build each export from one successful query result so X-Total-Records matches the served bytes and the database transaction ends before transfer.

Write security headers before the async file copy. Bound spool storage and clean it across retries, failed handoffs, timeouts, disconnects, and restarts.

Align the bundled download clients and deployment timeouts with generating the full spool before the first byte is sent.

Refs #3511, #5198
@clonder clonder added bug Something isn't working preview Triggers a deployment to argocd performance labels Jul 20, 2026
@claude claude Bot added backend related to the loculus backend component deployment Code changes targetting the deployment infrastructure labels Jul 20, 2026
@clonder clonder self-assigned this Jul 20, 2026

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@clonder and @corneliusroemer I heard you guys did some perf of this new feature - could you maybe summarize your results in the PR description? would be nice to have this for future reference :-)

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clonder requested a review from chaoran-chen July 21, 2026 11:34
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When calculating number of rows in get-released-data, cache to disk instead of requesting from db twice

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