Skip to content

mpcox/adwave

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

11 Commits
 
 
 
 
 
 
 
 

Repository files navigation

adwave

Wavelet analysis of genomic data from admixed populations

adwave is an R package that implements wavelet-based approaches for describing population admixture.

adwave uses Principal Components Analysis (PCA) to define population structure and produce a localized admixture signal for each individual. Wavelet summaries of the PCA output describe variation present in the data and can be related to population-level demographic processes.

For more details, see:

J Sanderson, H Sudoyo, TM Karafet, MF Hammer and MP Cox. 2015. Reconstructing past admixture processes from local genomic ancestry using wavelet transformation. Genetics 200:469-481.

Please download and install adwave directly from CRAN.

Author: Jean Sanderson
Maintainer: Murray Cox

About

Wavelet analysis of genomic data from admixed populations

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages