add tutorials to docs (#57)

* fix black formatting

* upgrade to joblib and add default permutation test (#52) (#54)

* upgrade to joblib and add default permutation test

* fix assertion errors

* fix block_size error

* fix black formatting

* remove random state and local dcorr tests

* Update independence.ipynb

* reformat to black code

* match notebooks to figures in paper

* updated algorith speed code

* just run HHG on this test

* Update indep_alg_speed.ipynb

* updated benchmark code

* remove random forest module

* update figure 1 of paper

* update mgc references to hyppo

* Fix bold letters in index.rst

* correct code coverage calculation

* make header longer in contributing

* change references from mgc to hyppo

* make jupyter notebooks python in status bar

* automatically update pypi with tag of release

* automatically update package version

* change references to hypothesis testing

* change mgc to joblib backend

* remove redundancy of checking size and shape

* add tutorials jupyter notebooks to docs

* fix folder location of power csvs

* updated independence curves

* add samp size and dimension tutorials

* updated dimension curves

* add time series sims and updated code

* Update setup.py

* fix time series p-value of 2

* add time series simulations

* fix k sample module to localize code

* add tutorials for functions in hyppo

* add pypi install instructions

* add k-sample references

* Delete independence.ipynb

* add mgcx to time_series

* rerun independence notebook

* remove graspy reference

* fix travis indenting issue

* fix mgc assertion errors

.gitattributes

@@ -0,0 +1 @@
+*.ipynb  linguist-vendored=true

.travis.yml

@@ -1,19 +1,19 @@
 language: python
 
 python:
-  - "3.5"
-  - "3.6"
-  - "3.7"
+- '3.5'
+- '3.6'
+- '3.7'
 
 jobs:
   include:
-    - os: windows
-      language: sh
-      python: "3.7"
-      before_install:
-        - choco install python3 --params "/InstallDir:C:\\Python" --version 3.7.4
-        - export PATH="/c/Python:/c/Python/Scripts:$PATH"
-        - python -m pip install --upgrade pip wheel
+  - os: windows
+    language: sh
+    python: '3.7'
+    before_install:
+    - choco install python3 --params "/InstallDir:C:\\Python" --version 3.7.4
+    - export PATH="/c/Python:/c/Python/Scripts:$PATH"
+    - python -m pip install --upgrade pip wheel
 
 branches:
   only:
@@ -34,4 +34,14 @@ after_success:
 - codecov
 
 notifications:
-- email: false
+- email: false
+
+deploy:
+- provider: pypi
+  user: "sampanda501"
+  password:
+    secure: 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
+  on:
+    tags: true
+    repo: neurodata/hyppo
+    python: '3.7'

README.md

@@ -1,18 +1,18 @@
 # hyppo
 
-[![Build Status](https://travis-ci.org/neurodata/hyppo.svg?branch=master)](https://travis-ci.org/neurodata/hyppo)
-[![codecov](https://codecov.io/gh/neurodata/hyppo/branch/master/graph/badge.svg)](https://codecov.io/gh/neurodata/hyppo)
-[![PyPI version](https://img.shields.io/pypi/v/hyppo.svg)](https://pypi.org/project/hyppo/)
-[![License](https://img.shields.io/github/license/neurodata/hyppo)](https://hyppo.neurodata.io/license.html)
+[![Build Status](https://travis-ci.org/neurodata/mgc.svg?branch=master)](https://travis-ci.org/neurodata/mgc)
+[![codecov](https://codecov.io/gh/neurodata/mgc/branch/master/graph/badge.svg)](https://codecov.io/gh/neurodata/mgc)
+[![PyPI version](https://img.shields.io/pypi/v/mgc.svg)](https://pypi.org/project/mgc/)
+[![License](https://img.shields.io/github/license/neurodata/mgc)](https://mgc.neurodata.io/license.html)
 [![arXiv shield](https://img.shields.io/badge/arXiv-1907.02088-red.svg?style=flat)](https://arxiv.org/abs/1907.02088)
 
-`hyppo` (**HYP**othesis Testing in **P**yth**O**n, pronounced "Hippo") is an open-source software package for independence and k-sample testing.
+`hyppo` (**HYP**othesis Testing in **P**yth**O**n, pronounced "Hippo") is an open-source software package for hypothesis testing.
 
-- **Installation Guide:** [https://hyppo.neurodata.io/install.html](https://hyppo.neurodata.io/install.html)
-- **Documentation:** [https://hyppo.neurodata.io/](https://hyppo.neurodata.io/)
-- **Tutorials:** [https://hyppo.neurodata.io/tutorials.html](https://hyppo.neurodata.io/tutorials.html)
-- **Source Code:** [https://github.com/neurodata/hyppo/tree/master/hyppo](https://github.com/neurodata/hyppo/tree/master/hyppo)
-- **Issues:** [https://github.com/neurodata/hyppo/issues](https://github.com/neurodata/hyppo/issues)
-- **Contribution Guide:** [https://hyppo.neurodata.io/contributing.html](https://hyppo.neurodata.io/contributing.html)
+- **Installation Guide:** [https://mgc.neurodata.io/install.html](https://mgc.neurodata.io/install.html)
+- **Documentation:** [https://mgc.neurodata.io/](https://mgc.neurodata.io/)
+- **Tutorials:** [https://mgc.neurodata.io/tutorials.html](https://mgc.neurodata.io/tutorials.html)
+- **Source Code:** [https://github.com/neurodata/mgc/tree/master/mgc](https://github.com/neurodata/mgc/tree/master/mgc)
+- **Issues:** [https://github.com/neurodata/mgc/issues](https://github.com/neurodata/mgc/issues)
+- **Contribution Guide:** [https://mgc.neurodata.io/contributing.html](https://mgc.neurodata.io/contributing.html)
 
-`hyppo` intends to be a comprehensive independence and k-sample testing package and runs on all major versions of operating systems. It also includes novel tests not found in other packages that operate on multivariate data. It is quick to install and free of charge. If you need to use multivariate hypothesis testing, be sure to give `hyppo` a try!
+`hyppo` intends to be a comprehensive hypothesis testing package and runs on all major versions of operating systems. It also includes novel tests not found in other packages that operate on multivariate data. It is quick to install and free of charge. If you need to use multivariate hypothesis testing, be sure to give `hyppo` a try!

benchmarks/vs_dimension/circle_CCA.csv

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benchmarks/vs_dimension/circle_Dcorr.csv

@@ -1,20 +1,20 @@
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benchmarks/vs_dimension/circle_HHG.csv

@@ -1,20 +1,20 @@
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benchmarks/vs_dimension/circle_Hsic.csv

@@ -1,20 +1,20 @@
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benchmarks/vs_dimension/circle_MGC.csv

@@ -0,0 +1,20 @@
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benchmarks/vs_dimension/circle_RV.csv

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benchmarks/vs_dimension/cubic_CCA.csv

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benchmarks/vs_dimension/cubic_Dcorr.csv

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