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10 Open 61 Closed
10 Open 61 Closed
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Issues list

Adding support for somatic variant calling (MuTect2) enhancement Improvement for existing functionality
#204 opened Apr 10, 2025 by amizeranschi
Variant annotation VEP plugins enhancement Improvement for existing functionality
#189 opened Mar 6, 2025 by leurwu 1.2.0
Add samtools markdup for UMI aware markdup enhancement Improvement for existing functionality
#181 opened Mar 3, 2025 by matthdsm 1.2.0
Thoughts on submitting RNAVar to a journal? question Further information is requested
#147 opened Jun 26, 2024 by Shaun-Regenbaum 1.2.0
Add samtools mpileup as an alternative variant caller enhancement Improvement for existing functionality
#110 opened Nov 28, 2023 by Leon-Bichmann 1.2.0
Add trimming step enhancement Improvement for existing functionality
#96 opened Aug 15, 2023 by bounlu 1.2.0
Single cell somatic mutations enhancement Improvement for existing functionality
#77 opened Nov 22, 2022 by cutleraging 1.2.0
1
Optional filter out RNA editing variants enhancement Improvement for existing functionality
#63 opened Jun 29, 2022 by ojziff 1.2.0
Summary metrics of haplotypecaller.filtered.vcf enhancement Improvement for existing functionality
#59 opened Jun 20, 2022 by ojziff 1.2.0
@praveenraj2018
1
SIFT missense predictions for genomes enhancement Improvement for existing functionality
#20 opened Feb 1, 2022 by m3hdad 1.2.0
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