fix: nf-core lint --fix files_unchanged

nf-core · Mar 7, 2022 · ceb10fc · ceb10fc
1 parent b5d2c6b
commit ceb10fc
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diff --git a/.github/ISSUE_TEMPLATE/bug_report.yml b/.github/ISSUE_TEMPLATE/bug_report.yml
@@ -1,4 +1,3 @@
-
 name: Bug report
 description: Report something that is broken or incorrect
 labels: bug

diff --git a/LICENSE b/LICENSE
@@ -1,6 +1,6 @@
 MIT License
 
-Copyright (c) Maxime Garcia, Szilveszter Juhos
+Copyright (c) Maxime Garcia, Szilveszter Juhos, Friederike Hanssen
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
 of this software and associated documentation files (the "Software"), to deal

diff --git a/lib/NfcoreSchema.groovy b/lib/NfcoreSchema.groovy
@@ -27,7 +27,7 @@ class NfcoreSchema {
     /* groovylint-disable-next-line UnusedPrivateMethodParameter */
     public static void validateParameters(workflow, params, log, schema_filename='nextflow_schema.json') {
         def has_error = false
-        //=====================================================================//
+        //~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~//
         // Check for nextflow core params and unexpected params
         def json = new File(getSchemaPath(workflow, schema_filename=schema_filename)).text
         def Map schemaParams = (Map) new JsonSlurper().parseText(json).get('definitions')
@@ -135,7 +135,7 @@ class NfcoreSchema {
             }
         }
 
-        //=====================================================================//
+        //~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~//
         // Validate parameters against the schema
         InputStream input_stream = new File(getSchemaPath(workflow, schema_filename=schema_filename)).newInputStream()
         JSONObject raw_schema = new JSONObject(new JSONTokener(input_stream))