Repositories list

• pyigmap

  Public
  [UNDER DEVELOPMENT] Pipeline for mapping and annotating T- and B-cell receptor gene rearrangement sequences

  workflowbioinformaticsrna-seq+ 7nextflowsequencingimmunologyamplicontcr-repertoirebcr-repertoireairr-seq

  Python

  •

  GNU General Public License v3.0

  •0•3•19•1•Updated Feb 21, 2025Feb 21, 2025

• Somatic_reference_standards

  Public
  Extended somatic reference standards of model cancer cell lines

  Python

  •

  Other

  •0•0•0•0•Updated Nov 20, 2024Nov 20, 2024

• PDAC.TME.George

  Public
  HTML

  •

  Other

  •1•2•0•0•Updated Nov 7, 2024Nov 7, 2024

• Immune_Escape

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• Cell_Atlas_MxIF

  Public
  Python

  •

  Other

  •1•2•1•1•Updated Sep 11, 2024Sep 11, 2024

• MFP

  Public
  Mollecular Functional Portraits

  HTML

  •

  Other

  •14•38•4•1•Updated Apr 3, 2024Apr 3, 2024

• LME

  Public
  Functions for classifying DLBCL into LME types

  Jupyter Notebook

  •

  Other

  •2•3•1•0•Updated Apr 3, 2024Apr 3, 2024

• STAD_TME

  Public
  Jupyter Notebook

  •

  Other

  •0•0•0•0•Updated Mar 11, 2024Mar 11, 2024

• MutAnt

  Public
  Shell

  •

  Other

  •0•0•0•0•Updated Feb 21, 2024Feb 21, 2024

• AgingHemaTopoMap

  Public
  Jupyter Notebook

  •

  Other

  •2•0•0•0•Updated Feb 19, 2024Feb 19, 2024

• Procrustes

  Public
  Jupyter Notebook

  •

  Other

  •0•3•0•0•Updated Feb 1, 2024Feb 1, 2024

• Multiregional_ccRCC

  Public
  Multi-omics analysis of multiregional ccRCC samples

  Jupyter Notebook

  •

  Other

  •0•2•0•0•Updated Jan 17, 2024Jan 17, 2024

• Kassandra

  Public
  Bostongene cell deconvolution algorithm from RNAseq

  Jupyter Notebook

  •

  Other

  •8•52•5•0•Updated Jan 15, 2024Jan 15, 2024

• B_cell_subtypes_FASEB_bioadvances_2023

  Public
  Other

  •0•0•0•0•Updated Feb 14, 2023Feb 14, 2023

• Blood_CYTOF_article

  Public
  Other

  •1•0•0•0•Updated Aug 11, 2022Aug 11, 2022