Repositories list

• Roddy

  Public
  The Roddy workflow development and management system.

  workflowbioinformaticspipeline+ 8workflow-enginelsfscientific-workflowsworkflow-managementhpc-applicationspbsgrid-engine+ 1

  Groovy

  •

  MIT License

  •3•8•76•1•Updated Apr 10, 2025Apr 10, 2025

• BatchEuphoria

  Public
  A library to access different kinds of cluster backends

  clusterjob-schedulersge+ 4lsfbatchpbsroddy

  Groovy

  •

  MIT License

  •5•3•24•1•Updated Apr 10, 2025Apr 10, 2025

• RoddyToolLib

  Public
  Tool library used in BatchEuphoria and Roddy

  Groovy

  •

  MIT License

  •2•0•1•0•Updated Mar 31, 2025Mar 31, 2025

• Roddy-Default-Plugin

  Public
  Roddies Default Plugin (Base for all Roddy plugins)

  roddy

  Shell

  •1•0•2•0•Updated Jun 18, 2024Jun 18, 2024

• BamToFastqPlugin

  Public archive
  This Roddy plugin contains a basic bam to fastq workflow using Picard and Samtools.

  bambiobambam2workflow+ 4picardbam-filesfastqroddy

  Shell

  •

  MIT License

  •0•1•1•0•Updated Nov 18, 2020Nov 18, 2020

• Roddy-Workflow-Deployment

  Public
  A repository dedicated to deploy Roddy workflows via e.g. Installer scripts or Docker containers.

  Shell

  •

  MIT License

  •0•0•0•5•Updated Jun 7, 2019Jun 7, 2019

• Roddy-Base-Plugin

  Public
  Roddy Base Plugin (used in all plugins)

  roddy

  Java

  •1•0•0•0•Updated Jul 25, 2018Jul 25, 2018