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    • Apps designed for generating insights into user data in KBase using KBase Datalake
      Python
      MIT License
      3010Updated Mar 5, 2026Mar 5, 2026
    • Service that returns similar genomes from a given assembly/genome ID
      Python
      MIT License
      30018Updated Mar 1, 2026Mar 1, 2026
    • Dashboard for visualizing data in the Genome Datatables object
      Python
      1000Updated Feb 22, 2026Feb 22, 2026
    • RAST_SDK

      Public
      Perl
      MIT License
      18113Updated Feb 13, 2026Feb 13, 2026
    • kb_djornl

      Public
      A KBase module wrapper and visualization for RWR tools which use the random walk with restart method on multiplex coexpression networks representing genes (node…
      Python
      MIT License
      5400Updated Jan 7, 2026Jan 7, 2026
    • Python
      MIT License
      1000Updated Dec 16, 2025Dec 16, 2025
    • kb_kaiju

      Public
      Python
      MIT License
      8002Updated Dec 8, 2025Dec 8, 2025
    • kb_gtdbtk

      Public
      GTDB-Tk App
      Python
      MIT License
      10473Updated Dec 2, 2025Dec 2, 2025
    • Python
      MIT License
      1000Updated Nov 5, 2025Nov 5, 2025
    • Python
      MIT License
      1001Updated Oct 21, 2025Oct 21, 2025
    • Python
      MIT License
      6220Updated Oct 21, 2025Oct 21, 2025
    • Utilities to import and map KBase Generic objects.
      Java
      MIT License
      1000Updated Oct 14, 2025Oct 14, 2025
    • kb_quast

      Public
      KBase wrapper for the QUAST assembly quality assessment tool.
      Python
      MIT License
      9002Updated Oct 8, 2025Oct 8, 2025
    • Python
      MIT License
      14032Updated Sep 22, 2025Sep 22, 2025
    • kb_Msuite

      Public
      Python
      MIT License
      11111Updated Sep 9, 2025Sep 9, 2025
    • This KBase app wraps the genome assembly software MaSuRCA(Maryland Super-Read Celera Assembler)
      Python
      MIT License
      3100Updated Sep 2, 2025Sep 2, 2025
    • KBase wrapper for the cutadapt tool
      Python
      MIT License
      5000Updated Sep 2, 2025Sep 2, 2025
    • Module for running the StringTie application (http://ccb.jhu.edu/software/stringtie/index.shtml)
      Python
      MIT License
      9211Updated Sep 2, 2025Sep 2, 2025
    • kb_SPAdes

      Public
      SPAdes wrapper
      Python
      MIT License
      16013Updated Jul 28, 2025Jul 28, 2025
    • BBTools

      Public
      Python
      MIT License
      4511Updated Jul 16, 2025Jul 16, 2025
    • First KBase App from ground up
      Python
      MIT License
      1000Updated Jun 3, 2025Jun 3, 2025
    • Python
      MIT License
      110104Updated May 26, 2025May 26, 2025
    • Python
      MIT License
      2000Updated Apr 15, 2025Apr 15, 2025
    • Python
      MIT License
      1001Updated Apr 10, 2025Apr 10, 2025
    • Save plain text, HTML documents, and files as output from a KBase app
      Python
      MIT License
      9010Updated Mar 6, 2025Mar 6, 2025
    • Python
      MIT License
      11000Updated Jan 30, 2025Jan 30, 2025
    • Python
      MIT License
      2008Updated Nov 1, 2024Nov 1, 2024
    • A dynamic service for creating and managing Static Narratives
      Python
      MIT License
      3103Updated Sep 1, 2024Sep 1, 2024
    • Python
      MIT License
      10000Updated Aug 23, 2024Aug 23, 2024
    • GitHub Actions workflow for testing KBase SDK-based apps.
      Shell
      0002Updated Aug 13, 2024Aug 13, 2024