Skip to content

@maehrlab maehrlab

Change the repository type filter

All

    Repositories list

    13 repositories

    • ThyroidUBB_Lineage

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Apr 13, 2026Apr 13, 2026

    • axolotl-thymus-regeneration

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Oct 14, 2025Oct 14, 2025

    • thymusatlasanalysis

      Public
      Analysis for our 2018 Immunity paper (cell atlas of mouse thymus development).
      R
      •1•3•1•0•Updated Aug 13, 2025Aug 13, 2025

    • epigenetic_characterization_hPFEv1

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Aug 17, 2023Aug 17, 2023

    • cellmatch

      Public
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Aug 1, 2023Aug 1, 2023

    • de_screen_analysis

      Public
      Code to reproduce our analyses from the definitive endoderm screen, April 2019 Cell Reports
      Python
      •1•1•0•0•Updated Feb 7, 2022Feb 7, 2022

    • pharyngeal_endoderm_development

      Public
      Jupyter Notebook
      •2•9•0•0•Updated Jan 27, 2022Jan 27, 2022

    • thymusatlastools2

      Public
      A set of general purpose tools for single cell analysis. Upgrade of thymusatlastools, also available on our Github.
      R
      •0•4•0•0•Updated Jan 6, 2022Jan 6, 2022

    • de_screen_atacTFAP

      Public
      Implementation of the atacTFAP analysis in our DE screen paper (April 2018 Cell Reports)
      R
      •0•0•0•0•Updated Apr 23, 2019Apr 23, 2019

    • bubblegrid

      Public
      Bubble grid plots for single-cell omics data
      R
      •
      Other
      •0•0•0•0•Updated Feb 7, 2019Feb 7, 2019

    • ggbio

      Public
      Grid and ggplot2 based visualization for biological data
      R
      •26•1•0•0•Updated Oct 12, 2018Oct 12, 2018

    • seurat

      Public
      R toolkit for single cell genomics
      R
      •
      GNU General Public License v3.0
      •995•1•0•0•Updated Sep 27, 2018Sep 27, 2018

    • thymusatlastools

      Public
      R package to accompany our recent Immunity paper on the mouse thymus developmental cell atlas.
      R
      •1•5•0•0•Updated May 29, 2018May 29, 2018
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.