Feature/upgrade pytorch

[lorenzomammana]

Summary

Aim of this PR is to finalize the upgrade of pytorch from 2.1.2 to 2.4.1.
Alongside this pytorch lightning has been upgraded to 2.4.0.
Multiple packages have been updated based on security issues coming from dependabot.

A detailed description of the changes is given in the changelog:

[2.3.0]

Updated

• Upgrade torch from 2.1.2+cu121 to 2.4.1+cu121
• Upgrade pytorch lightning to 2.4.0
• Upgrade onnxruntime-gpu to 1.20.0
• Upgrade anomalib to support the update lightning version
• Upgrade problematic packages notified by dependabot
• Deprecate python 3.9 support
• Update mypy, ruff and pylint to the latest available versions
• Apply pre-commits on all files based on the latest versions of the tools

Fixed

• Increase atol for mixed precision model export to avoid errors on efficientnet_b0 export
• Increase atol and rtol for model export tests to avoid issues on gpu testing

Type of Change

• Breaking change (fix or feature that would cause existing functionality to not work as expected)

Checklist

Please confirm that the following tasks have been completed:

• I have tested my changes locally and they work as expected. (Please describe the tests you performed.)
• I have added unit tests for my changes, or updated existing tests if necessary.
• I have updated the documentation, if applicable.
• I have installed pre-commit and run locally for my code changes.