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PomBase

The S. pombe Genome Database

5 followers
Cambridge, UK
https://www.pombase.org
@[email protected]
staff@pombase.org

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README.md

PomBase is a model organism database that provides organization of and access to scientific data for the fission yeast Schizosaccharomyces pombe.

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curation curation Public

PomBase curation

7
fypo fypo Public

Fission Yeast Phenotype Ontology

Makefile 16 6
canto canto Public

The PomBase community curation tool

JavaScript 19 7
pombase-chado pombase-chado Public

PomBase code for accessing Chado

Perl 5 3
website website Public template

PomBase website code

TypeScript 6 1

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Showing 10 of 40 repositories

pombase-chado-json Public
Read a PomBase Chado database and write it as JSON

pombase/pombase-chado-json’s past year of commit activity

Rust 1 MIT 1 0 0 Updated Jun 4, 2025
pombase-config Public
Shared configuration for PomBase projects

pombase/pombase-config’s past year of commit activity

Perl 0 2 4 0 Updated Jun 3, 2025
pombase-legacy Public
Code for handling legacy PomBase data

pombase/pombase-legacy’s past year of commit activity

Perl 0 MIT 1 0 0 Updated Jun 3, 2025
pombase-chado Public
PomBase code for accessing Chado

pombase/pombase-chado’s past year of commit activity

Perl 5 MIT 3 48 0 Updated Jun 3, 2025
genome_changelog Public

pombase/genome_changelog’s past year of commit activity

Python 1 MIT 1 1 0 Updated Jun 2, 2025
allele_qc Public
Quality control for PomBase alleles

pombase/allele_qc’s past year of commit activity

Python 1 MIT 1 10 0 Updated Jun 1, 2025
website Public template
PomBase website code

pombase/website’s past year of commit activity

TypeScript 6 MIT 1 90 1 Updated May 31, 2025
pombase-python-web Public
Python web code for the PomBase project

pombase/pombase-python-web’s past year of commit activity

HTML 0 1 0 0 Updated May 31, 2025
fypo Public
Fission Yeast Phenotype Ontology

pombase/fypo’s past year of commit activity

Makefile 16 CC-BY-4.0 6 125 1 Updated May 30, 2025
pombase-domain-process Public
Extract the InterPro data for the PomBase proteins and write as JSON

pombase/pombase-domain-process’s past year of commit activity

Rust 1 0 0 0 Updated May 28, 2025

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