Registry update at: 2025-02-08 04:29:55.714885

agerada.json

@@ -0,0 +1,7 @@
+[
+  {
+    "package": "MIC",
+    "maintainer": "Alessandro Gerada <[email protected]>",
+    "url": "https://github.com/agerada/mic"
+  }
+]

archived.csv

@@ -140,7 +140,6 @@
 "CHCN","1.5","Steven Mosher <[email protected]>",NA,2022-06-09,"check problems were not corrected despite reminders."
 "CHFF","0.1.0","Kyle A. Caudle <[email protected]>",NA,2025-01-26,"issues were not corrected despite reminders."
 "CHsharp","0.4","John Braun <[email protected]>",NA,2023-09-19,"check issues were not corrected in time. , Use of pre-F77 'DFLOAT'."
-"CIDER","0.99.1","Zhiyuan Hu <[email protected]>","https://github.com/zhiyhu/cider",2023-11-20,"issues were not corrected in time."
 "CIFsmry","1.0.1.1","Jianing Li <[email protected]>",NA,2022-12-05,"issues were not corrected despite reminders."
 "CISE","0.1.0","Lu Wang <[email protected]>",NA,2022-05-09,"check problems were not corrected despite reminders."
 "CLSOCP","1.0","Jason Rudy <[email protected]>",NA,2022-03-06,"check problems were not corrected in time."
@@ -1012,6 +1011,7 @@
 "SunterSampling","1.0.1","alessandro.barbiero <[email protected]>",NA,2022-06-14,"check problems were not corrected despite reminders."
 "SuperPCA","0.4.0","Jiayi Ji <[email protected]>",NA,2022-05-25,"requires archived package 'matlab'."
 "SurfaceReconstruction","0.1.0","Stéphane Laurent <[email protected]>","https://github.com/stla/surfacereconstruction",2022-08-11,"maintainer refused to correct errors."
+"Surrogate","3.3.1","Wim Van Der Elst <[email protected]>","https://github.com/florianstijven/surrogate-development",2025-02-07,"issues were not corrected in time."
 "SurvGSD","1.0.0","Chih-Yuan Hsu <[email protected]>",NA,2022-02-24,"mail to the maintainer is undeliverable."
 "Survgini","1.0","Chiara Gigliarano <[email protected]>",NA,2022-03-06,"check problems were not corrected in time."
 "SurvivalPath","1.3.2","Zhang Tao <[email protected]>","https://github.com/zhangt369/survivalpath",2022-12-05,"requires archived package 'survivalROC'."
@@ -1427,7 +1427,7 @@
 "cpca","0.1.2","Andrey Ziyatdinov <[email protected]>","https://github.com/variani/cpca",2023-08-18,"email to the maintainer is undeliverable."
 "cpk","1.3-1","Oscar A. Linares <[email protected]>",NA,2023-08-19,"at the request of the maintainer."
 "cpp11tesseract","5.3.2","Mauricio Vargas Sepulveda <[email protected]>","https://github.com/pachadotdev/cpp11tesseract",2024-11-06,"repeated policy violation.  Repeatedly spamming a team member's personal email address in HTML."
-"cppcontainers","1.0.4",NA,NA,2025-02-06,"issues were not corrected in time."
+"cppcontainers","1.0.4",NA,NA,2025-02-06,"issues were not corrected in time.  E.g. https://www.stats.ox.ac.uk/pub/bdr/M1-SAN/cppcontainers/"
 "cptec","0.1.1","Renato Prado Siqueira <[email protected]>","https://github.com/rpradosiqueira/cptec",2022-07-11,"policy violation.  On Internet access, to servicos.cptec.inpe.br."
 "cqcr","0.1.2","Evan Odell <[email protected]>","https://github.com/evanodell/cqcr",2023-08-08,"at the request of the maintainer."
 "crantastic","0.1","Bjorn Arild Maeland <[email protected]>","https://github.com/hadley/crantastic",2022-03-06,"check problems were not corrected in time."
@@ -2771,7 +2771,6 @@
 "saeHB.gpois","0.1.1","Joice Evangelista Lase <[email protected]>","https://github.com/joiceevangelista/saehb.gpois",2023-08-19,"email to the maintainer is undeliverable."
 "saeHB.hnb","0.1.2","Raka Ikmana <[email protected]>","https://github.com/rakaikmana/saehb.hnb",2023-08-19,"email to the maintainer is undeliverable."
 "saeHB.zinb","0.1.1","Hayun <[email protected]>","https://github.com/hayunbuto/saehb.zinb",2023-08-19,"email to the maintainer is undeliverable."
-"saery","1.0","Agustin Perez Martin <[email protected]>",NA,2022-06-14,"check problems were not corrected despite reminders."
 "safeBinaryRegression","0.1-3","Kjell Konis <[email protected]>",NA,2022-06-20,"check problems were not corrected despite reminders."
 "safedata","1.1.3","David Orme <[email protected]>","https://github.com/imperialcollegelondon/safedata",2024-04-20,"issues were not corrected despite reminders."
 "sail","0.1.0","Sahir Bhatnagar <[email protected]>","https://github.com/sahirbhatnagar/sail",2022-06-21,"check problems were not corrected despite reminders."
@@ -2977,7 +2976,6 @@
 "table1xls","0.4.0","Assaf P. Oron <[email protected]>",NA,2023-08-19,"email to the maintainer is undeliverable."
 "tableExtra","1.0.1","Yoann Pradat <[email protected]>",NA,2024-04-20,"issues were not corrected despite reminders."
 "tangles","0.8.1","Brendan Malone <[email protected]>",NA,2022-04-24,"check problems were not corrected in time."
-"taxize","0.9.100.1",NA,NA,2024-10-14,"orphaned weeks previously."
 "taxizedb","0.3.1",NA,NA,2024-08-31,"policy violation.  Spamming personal email address of team member in HTML."
 "taxonbridge","1.2.2","Werner Veldsman <[email protected]>","https://github.com/moultdb/taxonbridge",2024-07-01,"email to the maintainer is undeliverable."
 "taxotools","0.0.139","Vijay Barve <[email protected]>","https://github.com/vijaybarve/taxotools",2024-07-16,"issues were not corrected in time."

bioc.json

@@ -7558,7 +7558,7 @@
   },
   {
     "package": "microRNA",
-    "maintainer": "\"James F. Reid\" <[email protected]>",
+    "maintainer": "\"Michael Lawrence\" <[email protected]>",
     "url": "https://git.bioconductor.org/packages/microRNA",
     "registry": "bioc"
   },

crantogit.csv

@@ -1743,6 +1743,7 @@ CICA,https://github.com/jeffreydurieux/cica,,
 ciCalibrate,https://github.com/samch93/cicalibrate,,
 ciccr,https://github.com/sokbae/ciccr,,
 cicerone,https://github.com/johncoene/cicerone,,
+CIDER,https://github.com/zhiyuan-hu-lab/cider,,
 cifti,https://github.com/muschellij2/cifti,,
 ciftiTools,https://github.com/mandymejia/ciftitools,,
 CIMICE,https://github.com/redsnic/cimice,,bioc
@@ -1829,7 +1830,7 @@ clidamonger,https://github.com/iwugermany/clidamonger,,
 clidatajp,https://github.com/matutosi/clidatajp,,
 cliff,https://github.com/randy3k/cliff,,
 clifford,https://github.com/robinhankin/clifford,,
-clifro,https://github.com/ropensci/clifro,,
+clifro,https://github.com/ropensci-archive/clifro,,
 climaemet,https://github.com/ropenspain/climaemet,,
 climate,https://github.com/bczernecki/climate,,
 climateStability,https://github.com/hannahlowens/climatestability,,
@@ -5231,6 +5232,7 @@ GofCens,https://github.com/arnaugarciagrbio/gofcens,,
 gofCopula,https://github.com/simontrimborn/gofcopula,,
 gofedf,https://github.com/pnickchi/gofedf,,
 goffda,https://github.com/egarpor/goffda,,
+gofigR,https://github.com/gofigr/gofigr,,
 gofreg,https://github.com/gkremling/gofreg,,
 goftest,https://github.com/baddstats/goftest,,
 goldfish,https://github.com/stocnet/goldfish,,
@@ -7564,6 +7566,7 @@ mia,https://github.com/microbiome/mia,,bioc
 MIAmaxent,https://github.com/julienvollering/miamaxent,,
 miaSim,https://github.com/microbiome/miasim,,bioc
 miaViz,https://github.com/microbiome/miaviz,,bioc
+MIC,https://github.com/agerada/mic,,
 micar,https://github.com/obiba/micar,,
 micd,https://github.com/bips-hb/micd,,
 mice,https://github.com/amices/mice,,
@@ -13360,7 +13363,7 @@ SurfaceTortoise,https://github.com/ymutua/surfacetortoise,,
 SurfR,https://github.com/auroramaurizio/surfr,,bioc
 SurfRough,https://github.com/strevisani/surfrough,,
 surreal,https://github.com/coatless-rpkg/surreal,,
-Surrogate,https://github.com/florianstijven/surrogate-development,,
+Surrogate,https://github.com/florianstijven/surrogate-development,,archived
 SurrogateBMA,https://github.com/yunshandys/surrogatebma,,
 SurrogateRank,https://github.com/laylaparast/surrogaterank,,
 SurrogateRegression,https://github.com/zrmacc/surrogateregression,,
@@ -13587,6 +13590,7 @@ taxa,https://github.com/ropensci/taxa,,
 taxadb,https://github.com/ropensci/taxadb,,
 taxalight,https://github.com/cboettig/taxalight,,
 TaxaNorm,https://github.com/wangziyue57/taxanorm,,
+taxize,https://github.com/ropensci/taxize,,
 taxlist,https://github.com/ropensci/taxlist,,
 taxnames,https://github.com/kamapu/taxnames,,
 taxonomizr,https://github.com/sherrillmix/taxonomizr,,

florianstijven.json

@@ -2,6 +2,7 @@
   {
     "package": "Surrogate",
     "maintainer": "Wim Van Der Elst <[email protected]>",
-    "url": "https://github.com/florianstijven/surrogate-development"
+    "url": "https://github.com/florianstijven/surrogate-development",
+    "registry": "archived"
   }
 ]

gofigr.json

@@ -0,0 +1,7 @@
+[
+  {
+    "package": "gofigR",
+    "maintainer": "Maciej Pacula <[email protected]>",
+    "url": "https://github.com/gofigr/gofigr"
+  }
+]

index.json

@@ -153,6 +153,7 @@
   "agbarnett": 2,
   "agdamsbo": 2,
   "agency-fund": 1,
+  "agerada": 1,
   "ageyerschulz": 10,
   "aggregate-genius": 1,
   "agi-lab": 2,
@@ -3200,6 +3201,7 @@
   "godrigos": 1,
   "godwinyyung": 1,
   "goepp": 1,
+  "gofigr": 1,
   "gogonzo": 3,
   "gojiplus": 4,
   "gokmenzararsiz": 1,
@@ -5134,7 +5136,7 @@
   "lmavila": 1,
   "lme4": 1,
   "lmeninato": 1,
-  "lmesteban": 1,
+  "lmesteban": 2,
   "lmiratrix": 2,
   "lmjl-alea": 4,
   "lmrodriguezr": 2,
@@ -7437,7 +7439,7 @@
   "rootofunity": 1,
   "ropengov": 17,
   "ropensci": 229,
-  "ropensci-archive": 9,
+  "ropensci-archive": 10,
   "ropensci-review-tools": 1,
   "ropenspain": 7,
   "ropenstats": 1,
@@ -9540,6 +9542,7 @@
   "zhisu": 1,
   "zhiweilin27": 1,
   "zhiwent": 1,
+  "zhiyuan-hu-lab": 1,
   "zhuangr": 1,
   "zhuchao0228": 1,
   "zhukovyuri": 2,

lmesteban.json

@@ -1,4 +1,9 @@
 [
+  {
+    "package": "CUtools",
+    "maintainer": "Luis Mariano Esteban <[email protected]>",
+    "url": "https://github.com/cran/CUtools"
+  },
   {
     "package": "PTwins",
     "maintainer": "Luis Mariano Esteban <[email protected]>",

ropensci-archive.json

@@ -1,4 +1,9 @@
 [
+  {
+    "package": "clifro",
+    "maintainer": "Blake Seers <[email protected]>",
+    "url": "https://github.com/ropensci-archive/clifro"
+  },
   {
     "package": "conditionz",
     "maintainer": "Scott Chamberlain <[email protected]>",

ropensci.json

@@ -144,11 +144,6 @@
     "maintainer": "Jeroen Ooms <[email protected]>",
     "url": "https://github.com/ropensci/cld3"
   },
-  {
-    "package": "clifro",
-    "maintainer": "Blake Seers <[email protected]>",
-    "url": "https://github.com/ropensci/clifro"
-  },
   {
     "package": "codemetar",
     "maintainer": "Carl Boettiger <[email protected]>",
@@ -986,6 +981,11 @@
     "maintainer": "Carl Boettiger <[email protected]>",
     "url": "https://github.com/ropensci/taxadb"
   },
+  {
+    "package": "taxize",
+    "maintainer": "Zachary Foster <[email protected]>",
+    "url": "https://github.com/ropensci/taxize"
+  },
   {
     "package": "taxlist",
     "maintainer": "Miguel Alvarez <[email protected]>",

svmiller.json

@@ -26,7 +26,7 @@
   },
   {
     "package": "stevetemplates",
-    "maintainer": "Steven V. Miller <steven.v.miller@gmail.com>",
+    "maintainer": "Steven Miller <steve@svmiller.com>",
     "url": "https://github.com/svmiller/stevetemplates"
   },
   {

universes.csv

@@ -2936,6 +2936,7 @@ ciccr,sokbae
 cicero,bioc
 cicerone,johncoene
 CICI,cran
+CIDER,zhiyuan-hu-lab
 CIEE,skonigor
 cif,cran
 CIfinder,cran
@@ -3076,7 +3077,7 @@ clidamonger,iwugermany
 clidatajp,matutosi
 cliff,randy3k
 clifford,robinhankin
-clifro,ropensci
+clifro,ropensci-archive
 CliftLRD,cran
 clikcorr,cran
 climaemet,ropenspain
@@ -3364,6 +3365,7 @@ coga,chaoranhu
 CoGAPS,bioc
 cogena,bioc
 cogeqc,bioc
+cogirt,cran
 Cogito,bioc
 coglasso,drquestion
 cogmapr,cran
@@ -4253,6 +4255,7 @@ cusum,cran
 cusumcharter,johnmackintosh
 CUSUMdesign,boxiang-wang
 cutoff,yikeshu0611
+CUtools,lmesteban
 cutpointr,thie1e
 CutpointsOEHR,chenyimin0226
 cv,gmonette
@@ -8598,6 +8601,7 @@ gofedf,pnickchi
 goffda,egarpor
 gofgamma,ebner-kit
 gofIG,ebner-kit
+gofigR,gofigr
 GoFKernel,cran
 GofKmt,jwboys26
 gofreg,gkremling
@@ -10855,6 +10859,7 @@ KOGMWU,z0on
 kohonen,rwehrens
 koinar,bioc
 kokudosuuchi,yutannihilation
+kollaR,cran
 komaletter,rnuske
 konfound,konfound-project
 KONPsurv,matan-schles
@@ -12569,6 +12574,7 @@ mia,bioc
 MIAmaxent,julienvollering
 miaSim,bioc
 miaViz,bioc
+MIC,agerada
 micar,obiba
 micd,bips-hb
 mice,amices
@@ -16035,6 +16041,7 @@ PolyHaplotyper,roelandv
 polyhedralCubature,stla
 polylabelr,jolars
 polymapR,pbourkey
+polymatching,cran
 polyMatrix,namezys
 polynom,billvenables
 PolynomF,billvenables
@@ -19357,6 +19364,7 @@ saeMSPE,exce1sior1008
 saens,alfrzlp
 saePseudo,darinhuwaidaa
 saeRobust,wahani
+saery,cran
 saeSim,wahani
 saeTrafo,norawuerz
 SAEval,andrea-fasulo
@@ -21660,6 +21668,7 @@ stocc,dsjohnson
 StochBlock,aleszib
 stochLAB,hidef-aerial-surveying
 stochQN,david-cortes
+stochtree,cran
 stochvol,gregorkastner
 stochvolTMB,jenswahl
 stockAnalyst,maheshpkumar
@@ -21980,6 +21989,7 @@ svars,alexanderlange53
 svd,asl
 svDialogs,sciviews
 svDialogstcltk,sciviews
+SVDMx,cran
 SVDNF,louiszam
 SVEMnet,akarl46556
 svenssonm,lexizhu

zhiyuan-hu-lab.json

@@ -0,0 +1,7 @@
+[
+  {
+    "package": "CIDER",
+    "maintainer": "Zhiyuan Hu <[email protected]>",
+    "url": "https://github.com/zhiyuan-hu-lab/cider"
+  }
+]