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Fodf optional#32

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EliseCos wants to merge 3 commits intoscilus:mainfrom
EliseCos:fodf_optional
Open

Fodf optional#32
EliseCos wants to merge 3 commits intoscilus:mainfrom
EliseCos:fodf_optional

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@EliseCos
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Allow the possibility to deactivate fODF process + add sentence with the tracking

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@arnaudbore arnaudbore left a comment

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Please modify also the file nextflow_schema.json

Comment on lines +174 to +182
if ( params.run_fodf ) {
RECONST_FRF(ch_for_reconst.map{ it + [[], [], []]})
ch_for_reconst_fodf = ch_for_reconst
.join(RECONST_DTIMETRICS.out.fa)
.join(RECONST_DTIMETRICS.out.md)
.join(RECONST_FRF.out.frf)
.map{ it + [[], []]}
RECONST_FODF(ch_for_reconst_fodf)

}
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Suggested change
if ( params.run_fodf ) {
RECONST_FRF(ch_for_reconst.map{ it + [[], [], []]})
ch_for_reconst_fodf = ch_for_reconst
.join(RECONST_DTIMETRICS.out.fa)
.join(RECONST_DTIMETRICS.out.md)
.join(RECONST_FRF.out.frf)
.map{ it + [[], []]}
RECONST_FODF(ch_for_reconst_fodf)
}
if ( params.run_fodf ) {
RECONST_FRF(ch_for_reconst.map{ it + [[], [], []]})
ch_for_reconst_fodf = ch_for_reconst
.join(RECONST_DTIMETRICS.out.fa)
.join(RECONST_DTIMETRICS.out.md)
.join(RECONST_FRF.out.frf)
.map{ it + [[], []]}
RECONST_FODF(ch_for_reconst_fodf)
}

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2 participants