Adding visualization commands and cleaning b-tensor files (to the docs)#1289
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karanphil wants to merge 1 commit intoscilus:masterfrom
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Adding visualization commands and cleaning b-tensor files (to the docs)#1289karanphil wants to merge 1 commit intoscilus:masterfrom
karanphil wants to merge 1 commit intoscilus:masterfrom
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Codecov Report✅ All modified and coverable lines are covered by tests. Additional details and impacted files@@ Coverage Diff @@
## master #1289 +/- ##
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Coverage 72.59% 72.59%
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Files 294 294
Lines 25339 25339
Branches 3546 3546
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Hits 18395 18395
+ Misses 5448 5447 -1
- Partials 1496 1497 +1
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Quick description
I added the command to visualize the fODFs (in the ssst, msmt and memsmt cases).
I also split the b-tensor CSD (memsmt-CSD) and the use of DIVIDE on b-tensor data.
The wm_mask and mask (they are the same) used in the ssst-CSD demo are kind of broken... they have a lot of voxels outside of the brain, and the mask being limited to single-fiber voxels does not produce nice images for the fODF visualization. However, I think it is needed to shorten the computing time.