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191 Open 262 Closed
191 Open 262 Closed
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Issues list

Image2DModel.validate throwing unexpected error
#865 opened Feb 9, 2025 by sophiamaedler
Unrecognized zarr version for example dataset in tutorial
#863 opened Feb 4, 2025 by keviny2
3
Check for regular chunks before writing models
#862 opened Feb 4, 2025 by LucaMarconato
Tests fails with dask==2024.12.0 and dask==2024.12.1 dependencies 🐣 Cause of, and solution to, all of life's problems
#860 opened Feb 4, 2025 by LucaMarconato
read_zarr from s3
#859 opened Feb 4, 2025 by j-bac
1
Efficient whole slide imaging IO
#856 opened Jan 31, 2025 by Mr-Milk
1
Enable partial reading for specific subsets of elements I/O 💿
#855 opened Jan 30, 2025 by LucaMarconato
Shape mismatch in dataloader when rasterization is not used.
#854 opened Jan 30, 2025 by LucaMarconato
JoinTypes.__members__ empty in Python 3.13
#852 opened Jan 30, 2025 by LucaMarconato
2 of 5 tasks
Memory leak in bounding_box_query?
#850 opened Jan 29, 2025 by grst
RasterModel.parse() should accept also DataTree. models tiledb-soma
#847 opened Jan 26, 2025 by LucaMarconato
Cases uncaught from validation for raster data models tiledb-soma
#846 opened Jan 25, 2025 by LucaMarconato
1 task
Incremental reading APIs I/O 💿
#843 opened Jan 24, 2025 by LucaMarconato
Save custom .attrs in SpatialElements to disk
#839 opened Jan 21, 2025 by lucas-diedrich
8
Add dev on NGFF version number created by internal call of ome-zarr-py
#838 opened Jan 20, 2025 by LucaMarconato
1
Add missing docstrings docs 📜 Documentation-related issues
#836 opened Jan 20, 2025 by LucaMarconato
v0.2.6 broken due to updates in Dask
#835 opened Jan 17, 2025 by adkinsrs
4
Importing ROIs and transformations from QuPath
#834 opened Jan 17, 2025 by JRS92
2
Enhancement: Local SpatialData object with remotely accessed pyramidal OME-ZARR image
#831 opened Jan 15, 2025 by edoumazane
4
Jupyter kernel crashing with sdata.write
#827 opened Jan 14, 2025 by josenimo
2
Problem with indices with left_exclusive join
#824 opened Jan 13, 2025 by LucaMarconato
1
questions about alignment in Figure 2b
#816 opened Jan 3, 2025 by yuling999666
4
Error (Codec does not support buffers > 2GB) when trying to save zarr directory priority: medium
#812 opened Dec 17, 2024 by kotr98
@timtreis
8
How to open the current Zarr based image data as OME-Zarr
#805 opened Dec 9, 2024 by tischi
3
Elements should be validated before starting to write
#804 opened Dec 9, 2024 by timtreis
1
ProTip! Updated in the last three days: updated:>2025-02-06.