Pinned Loading

1. get_asv_reads get_asv_reads Public

   R function to pull out all of the reads that make up an ASV produced from the DADA2 pipeline

2. asv_tree_builder asv_tree_builder Public

   Using 16S sequencing data and ASV's generated with DADA2, plus a comprehensive reference database, an automated snakemake pipeline to seamlessly integrate steps from sequence retrieval to sequence …

   Python

3. mcsmrt mcsmrt Public

   Forked from jpearl01/mcsmrt

   Microbiome Classifier Pipeline for Pacific Biosciences 16s Data

   Ruby

4. microbiome_analysis_and_report microbiome_analysis_and_report Public

   A bash script to run, analyze, and report on microbiome analysis results following Circular Consensus Sequencing and Demultiplexing using Pacbio SMRTLink software, MCSMRT microbiome classification,…

   Python