Skip to content

Issues: seandavi/GEOquery

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

23 Open 101 Closed
23 Open 101 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

how to analyze soft file on the local disk
#155 opened Nov 6, 2024 by wymin576
@seandavi
Using GEOquery with private data
#154 opened Sep 4, 2024 by TSI-PTG
@seandavi
Issues with installing GEOquery package
#153 opened Aug 27, 2024 by nilanjana1996
@seandavi
Release GEOquery 3.0.0
#152 opened Jul 31, 2024 by seandavi
19 tasks
GSElimits not working
#151 opened Jul 18, 2024 by ooverbee
@seandavi
Bug Report: Encoding Parameter Issue and Error Handling in getGEO Function of GEOquery Package
#148 opened Mar 14, 2024 by Guossin
GEOquery not respecting timeout option
#147 opened Oct 30, 2023 by seandavi
1
help with getGEO
#138 opened Nov 1, 2022 by rominaappierdo
@seandavi
Error when using getGEO bug
#135 opened Jul 8, 2022 by iagogv3
@seandavi
1
getGEO
#133 opened Jun 14, 2022 by chenx9
@seandavi
5
Move to fs::path rather than file.path
#131 opened Jun 3, 2022 by dereckmezquita
@seandavi
All of the Documentation is Missing
#103 opened Sep 25, 2020 by DarioS
AnnotatedDataFrame 'initialize' could not update varMetadata
#98 opened Jan 21, 2020 by khughitt
Default amount for soft files
#90 opened May 21, 2019 by assaron
1
Converting GSE to an ExpressionSet
#84 opened Apr 5, 2019 by JanLanzer
Parsing single cell GSE and get series_table enhancement
#80 opened Dec 27, 2018 by rjpbonnal
@seandavi
2
GEOquery Description Describes Non-Default Functionality
#71 opened Jun 12, 2018 by DarioS
getGEOSuppFiles should take a "quiet" argument and pass it to file.download
#68 opened Mar 15, 2018 by wobenshain
using parseCharacteristics = FALSE still parses characteristics
#60 opened Dec 6, 2017 by kalugny
GEOquery should recognize non-public accesions bug enhancement
#58 opened Dec 5, 2017 by seandavi
@seandavi
Deal with NA in GDS dataset IDs bug
#21 opened Sep 17, 2015 by seandavi
@seandavi
not run getGPL=F in getGEO
#18 opened Sep 2, 2015 by tekfenonline
@seandavi
1
Parse "quick" output
#14 opened May 8, 2015 by seandavi
@seandavi
ProTip! Updated in the last three days: updated:>2025-04-06.