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Update Singularity.v3.9-torch1.13.1-dj0.13.1.def #14

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Update Singularity.v3.9-torch1.13.1-dj0.13.1.def #14

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bd073ed
Update Singularity.v3.9-torch1.13.1-dj0.13.1.def
kklurz Apr 27, 2023
c5db047
Merge pull request #15 from sinzlab/main
kklurz Apr 27, 2023
0ad635e
change ubuntu version
kklurz Apr 27, 2023
6eb0adb
test same file as was already working from MAx
kklurz Apr 27, 2023
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17 changes: 8 additions & 9 deletions Singularity.v3.9-torch1.13.1-dj0.13.1.def
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Original file line number Diff line number Diff line change
@@ -1,13 +1,11 @@
BootStrap: docker
From: ubuntu:22.04
From: ubuntu:21.10

%labels
MAINTAINER Christoph Blessing <[email protected]>

%post
apt update
DEBIAN_FRONTEND=noninteractive TZ=Etc/UTC apt install -y tzdata
apt install -y software-properties-common
apt update && apt install -y software-properties-common
add-apt-repository universe


Expand Down Expand Up @@ -47,7 +45,7 @@ MAINTAINER Christoph Blessing <[email protected]>
blackcellmagic\
pytest \
pytest-cov \
numpy==1.23.5 \
numpy \
matplotlib \
scipy \
pandas \
Expand All @@ -61,12 +59,13 @@ MAINTAINER Christoph Blessing <[email protected]>
gitpython \
Pillow==8.0.1 \
jupyterlab \
datajoint==0.13.1
datajoint==0.12.7

python3.9 -m pip --no-cache-dir install \
torch==1.13.1 \
torchvision==0.14.1 \
torchaudio==0.13.1 \
torch==1.11.0+cu113 \
torchvision==0.12.0+cu113 \
torchaudio==0.11.0+cu113 \
-f https://download.pytorch.org/whl/cu113/torch_stable.html

%environment
export SHELL=/bin/sh
Expand Down