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@statgen

Center for Statistical Genetics

The Center for Statistical Genetics at the University of Michigan School of Public Health

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  1. pheweb pheweb Public

    A tool to build a website to browse hundreds or thousands of GWAS.

    Python 188 74

  2. locuszoom locuszoom Public

    A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

    JavaScript 163 30

  3. demuxlet demuxlet Public

    Genetic multiplexing of barcoded single cell RNA-seq

    C++ 131 26

  4. SLURM-examples SLURM-examples Public

    Python 94 27

  5. bamUtil bamUtil Public

    C++ 91 30

  6. Minimac4 Minimac4 Public

    C++ 73 25

Repositories

Showing 10 of 120 repositories
  • colocus-ui-vue3 Public
    statgen/colocus-ui-vue3’s past year of commit activity
    JavaScript 0 0 0 1 Updated Dec 17, 2025
  • cloudgene3 Public Forked from genepi/cloudgene3

    A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.

    statgen/cloudgene3’s past year of commit activity
    Java 0 MIT 7 0 0 Updated Dec 16, 2025
  • tis-v2-cli Public

    Provides utilities to access the TOPMed Imputation Server programmatically.

    statgen/tis-v2-cli’s past year of commit activity
    Python 0 0 1 0 Updated Dec 12, 2025
  • colocus Public

    A browser for display of fine-mapped genetic signals and their colocalizations

    statgen/colocus’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 11, 2025
  • bravo_api Public

    Server side data processing and retrieval endpoints for BRAVO

    statgen/bravo_api’s past year of commit activity
    Python 1 MIT 2 16 0 Updated Dec 10, 2025
  • imputationserver2 Public Forked from genepi/imputationserver2

    Imputation Server 2 workflow to facilitate genotype imputation at scale.

    statgen/imputationserver2’s past year of commit activity
    Nextflow 0 MIT 12 0 0 Updated Dec 3, 2025
  • bravo_vue Public

    BRAVO's Vue JS based UI.

    statgen/bravo_vue’s past year of commit activity
    Vue 0 0 13 17 Updated Nov 27, 2025
  • tis-v2-docs Public

    User-facing documentation for the TOPMed Imputation Server v2 (Nextflow edition)

    statgen/tis-v2-docs’s past year of commit activity
    0 0 0 0 Updated Nov 25, 2025
  • fipip_manuscript Public

    Manuscript source files to reproduce fiPIP manuscript display items

    statgen/fipip_manuscript’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 24, 2025
  • fipip Public
    statgen/fipip’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Nov 20, 2025
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