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lines changed Original file line number Diff line number Diff line change @@ -7,7 +7,7 @@ See [Figure 2](index.qmd#fig-2) for the meanings of the abbreviations used in th
77## 1. LC-MS (DDA) for proteomics
88### 1-1 Input data
99The dataset for reproducing this tutorial can be obtained from
10- [ ![ DOI] ( https://zenodo.org/badge/DOI/10.5281/zenodo.15369007.svg )] ( https://zenodo.org/badge/DOI/10.5281/zenodo.15369007 )
10+ [ ![ DOI] ( https://zenodo.org/badge/DOI/10.5281/zenodo.15369007.svg )] ( https://zenodo.org/badge/DOI/10.5281/zenodo.15369007 ) \
1111This tutorial utilizes 2 raw data files (* .raw) from https://repository.jpostdb.org/entry/JPST000200 .
1212The human_proteins_ref.fasta was obtained from https://www.uniprot.org/ .
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@@ -18,8 +18,7 @@ MSDIAL.exe file in the downloaded folder (1). Click on “New
1818project” (2). You can name your project according to your preferences.
1919Browse to the location of your experimental files. Click next and then
2020continue to the second left side bar “Raw measurement files”. Here,
21- click browse to access your raw data files.]
22- (images/proteomics/Fig1%20Starting%20up%20a%20project.png)
21+ click browse to access your raw data files.] ( images/proteomics/Fig1%20Starting%20up%20a%20project.png )
2322
2423![ Figure 2: Importing raw data files and setting up the measurement
2524parameters. Change the type of file according to your vendor format
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