Bioinformatics

Selected Coding Challenges from Coursera Bioinformatics VI by UCSD - Finding Mutations in DNA and Proteins

Name		Name	Last commit message	Last commit date
Latest commit History 21 Commits
genomeSequencing		genomeSequencing
.DS_Store		.DS_Store
BTW.py		BTW.py
BWMatching.py		BWMatching.py
ProfileHMM.py		ProfileHMM.py
ProfileHMMwithPseudocounts.py		ProfileHMMwithPseudocounts.py
ProfileHMMwithPseudocounts_new.py		ProfileHMMwithPseudocounts_new.py
README.md		README.md
betterBWMatching.py		betterBWMatching.py
betterBWMatchingWCheckpoint.py		betterBWMatchingWCheckpoint.py
betterBWMatching_improved.ipynb		betterBWMatching_improved.ipynb
constructSuffixArray.py		constructSuffixArray.py
constructTrie.py		constructTrie.py
getNumRuns.py		getNumRuns.py
getProbofHMM.py		getProbofHMM.py
inverseBWT.py		inverseBWT.py
likelihood.py		likelihood.py
partialSuffixArray.py		partialSuffixArray.py
probOutcomeGivenHidden.py		probOutcomeGivenHidden.py
trieMatching.py		trieMatching.py
viterbi.py		viterbi.py

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