Nonlinear regression using to estimate kinetics constants of DNA promoter opening and escape during transcription initiation complex assembled between Lambda PR promoter and E. coli RNA polymerase.
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Apr 16, 2019
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rna-polymerase
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Modular Python pipeline for identifying RNA Polymerase IV (NRPD1) orthologs in plant genomes. Features BLAST+ integration, custom domain analysis, and a JSON-configurable rule-based validation system for Pol II/IV/V distinction.
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Mar 19, 2026 - Jupyter Notebook
In this module, you will learn how to perform the bioinformatics analysis of differential chromatin occupancy using data generated by three well-known high-throughput sequencing assaying, including differences between them and integration of chromatin accessibility and differential gene expression
bioinformatics transcription-factors gcp next-generation-sequencing epigenetics chip-seq atac-seq histone-modifications high-throughput-sequencing differential-gene-expression differential-analysis protein-dna-interactions chromatin-accessibiity aws-sagemaker rna-polymerase peak-identification chromatin-occupancy nih-nigms
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Jun 4, 2025 - HTML
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