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Integrate steppyngstounes and azure#830

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guyer wants to merge 176 commits intomasterusnistgov/fipy:masterfrom integrate_steppyngstounes_and_azureusnistgov/fipy:integrate_steppyngstounes_and_azureCopy head branch name to clipboard

Commits

Commits on Jan 28, 2021

• Convert binary phase field example to use steppyngstounes

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• Convert to quadratic time stepper for very long times

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• Visualize interface position

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• Add discussion of binary phase field behavior

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• Add mass conservation to step size control

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• Reduce simulation time

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• Create a custom viewer

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• Correct description of time steps

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• Explain merits of steppyngstounes

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• Apply steppyngstounes to binaryCoupled

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• Update figures for binary phase field examples

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• Revise description of solidification evolution

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• Deprecate fipy.steppers

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• Add discussion of adaptive stepping to USAGE

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• Fix spelling errors

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• Install steppyngstounes on CIs

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• Discard result of succeeded()

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• Fix typo

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• Fix math

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Commits on Feb 3, 2021

• Ensure mass conservation of early evolution

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• Fix LaTeX

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• Fix LaTeX

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Commits on Sep 23, 2021

• Set up CI with Azure Pipelines

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• Update pipelines.yml for Azure Pipelines

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• Switch to mamba

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• Fix mamba install options

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• Just install fipy

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• Fix strategy name

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• Split mamba installation into two steps

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• Tell mamba yes

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Commits on Sep 24, 2021

• Install fipy prereqs w/o fipy

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• Add prereqs

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• Fix matrix variable

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• Remove pytrilinos

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• Install gmsh separately

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• Install different packages for different Pythons

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• Add linux install template

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• Template install

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• Fix typo

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• Add macOS setup step

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• Introduce macOS builds

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• Fix typo

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• Change to single quotes

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• Take out macos step

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• Move macos step to pipeline.yml

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• Fix condition(?)

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• Microsoft is whack

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• What an utterly batty syntax

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Commits on Sep 25, 2021

• Refactor ubuntu and macos installations

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• Try to figure out compile-time vs run-time variables

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• More fiddling with azure variables

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• More more fiddling with azure variables

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• More more more

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• More**4

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• More**5

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• More**6

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• Try to select template at runtime

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• Fix typos

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• Trying to access matrix variables at runtime

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• Use matrix variables at compile time

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• Fix or syntax

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• Add windows build

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• Fix conditional syntax

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• Fix the fix

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• What a mess

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• Pass platform to template

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• Add logging

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Commits on Sep 26, 2021

• Add diagnostic

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• Fix syntax

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• Echo lots of stuff

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• Echo some new stuff

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• Why is this syntax so stupid?

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Commits on Sep 27, 2021

• Use variable

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• Pass isBash as parameter

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• Read isBash as parameter

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• Fix typo

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• Debug?

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• Comment out troublesome expression

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• Switch back to platform.parameters

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• Change parameters syntax

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• Change parameters syntax

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• Add diagnostics

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• Mix compile time and run time

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• Try some quotes

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• Microsoft are full of crap

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• Add more diagnostics

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• Runtime?

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• ???

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• Quotes

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• Add conditional template

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• I hate this crap

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• Add template to matrix

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• Replicate what's in documentation

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• Make conditional

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• Try try again

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• Fix typo

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• Add diagnostics

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• Introduce bash boolean

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• Spell out variable

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• WTF is the syntax?

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• Spell out all parameters

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• Why is there no table of types!?

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• Stumbling around in the dark

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• Fix typo

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• Don't useBash

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• Change parameters to variables

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• Take out of squigglies

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• Try something else

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• Echo the right things

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• Check Microsoft lies

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• Fix typo

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• Revert "Fix typo"

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• Revert "Check Microsoft lies"

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• Simplify

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Commits on Sep 29, 2021

• Change platform to image and put conditions on each step

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• Try stages

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• Switch to stages and jobs

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• Revert "Switch to stages and jobs"

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• Revert "Try stages"

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• Use bash for everybody!

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• Distinguish conda path between unix and windows

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• Configure conda

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• Use jobs

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• Strip quotes from matrix values

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• Re-add some quotes

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• Introduce FIPY_SOLVERS

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• Add solver to matrix names

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• Introduce parallel

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• Define MPIRUN for all variants

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• Add HTML doc build

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• Specify image

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• Specify environment to export

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• Specify image variable

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• Change variables to parameters

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• De-dot parameter names

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• Combine mamba installs

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• Install packages needed by docs

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• Activate environment

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• Split mamba install back into two steps

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• Publish HTML tarball

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• Build PDF

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• Install LaTeX

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• sudo the things

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Commits on Sep 30, 2021

• Try caching

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• Move variables from template to pipeline!?

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• Initialize myEnvironment.yml

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• Make installation a dependency

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• Comment out installation configurations that block dependencies

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• Cache actual environment

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• Revert caching experiments

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• Revert "Try caching"

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• Make installation a dependency

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• Revert "Make installation a dependency"

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• Add jobs

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• Activate environment

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• Build unix binaries

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• Build windows distribution

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• Separately publish artifacts

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• Install pytrilinos under Python 3.7

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• Ensure mamba installed with correct python

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• Distinguish artifacts correctly

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Commits on Nov 19, 2021

• Ping the build

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• Disable f-string warning in pylint

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• Fix pylint section name

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• Attempt to only pip on Py3k

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• Fix conditional

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Commits on Nov 20, 2021

• mamba install from Py3k

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• Install mamba in base environment

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Commits on Nov 22, 2021

• install mamba with mamba

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• Install libGL on linux

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• Install libGL as sudoer

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• Differentiate windows mamba install

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• Differentiate Py2.7 and Py3k mamba installs

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• Fix syntax for mamba installs from active environment

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Commits on Nov 23, 2021

• Remove older, slower CIs

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• Merge branch 'issue620-Working_example_of_adaptive_stepper-use_steppyngstounes' into integrate_steppyngstounes_and_azure

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