AnnoGenie

A bioinformatics pipeline for the de-novo annotation of genomes using NGS data from closely related species.

Name		Name	Last commit message	Last commit date
Latest commit History 28 Commits
.DS_Store		.DS_Store
AnnoGenie.sh		AnnoGenie.sh
AnnoGenie.yml		AnnoGenie.yml
BLAST_sample1.fa		BLAST_sample1.fa
Blast.sh		Blast.sh
Blast_gff3.sh		Blast_gff3.sh
Blast_single.sh		Blast_single.sh
README.md		README.md
StringTie_gffread.job		StringTie_gffread.job
Togff3.sh		Togff3.sh
fastqc.sh		fastqc.sh
hisat2_align.job.sh		hisat2_align.job.sh
hisat2_index.job		hisat2_index.job
modified_output.gff		modified_output.gff
modify.sh		modify.sh

Provide feedback