Update Hotelling's test for paired t-tests

wejlab · Feb 6, 2025 · e9be343 · e9be343
1 parent c1cbe1a
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: LegATo
 Title: LegATo: Longitudinal mEtaGenomic Analysis Toolkit
-Version: 1.1.0
+Version: 1.1.1
 Authors@R: c(
     person("Aubrey", "Odom", , "[email protected]", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0001-7113-7598")),
@@ -72,4 +72,4 @@ Config/testthat/edition: 3
 Encoding: UTF-8
 Language: en-US
 LazyData: FALSE
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2
diff --git a/R/test_hotelling_t2.R b/R/test_hotelling_t2.R
@@ -78,7 +78,7 @@
       for_testing <- input_data %>% dplyr::filter(.data$Taxon == tax)
       out_test <- stats::t.test(stats::formula("Abundance ~ Populations"), for_testing,
                                 alternative = "two.sided",
-                                var.equal = FALSE, paired = FALSE)
+                                var.equal = FALSE)
       return(list(t = out_test$statistic, df = out_test$parameter,
                   diff_means = out_test$estimate[1],
                   CI_2.5 = out_test$conf.int[1],