Merge pull request #93 from dkj/devcontainer

Initial devcontainer config

.devcontainer/devcontainer.json

@@ -0,0 +1,36 @@
+{
+	"name": "ubuntu-dood-go-sqyrrl",
+	// Or use a Dockerfile or Docker Compose file. More info: https://containers.dev/guide/dockerfile
+	//"image": "mcr.microsoft.com/devcontainers/base:jammy",
+	"dockerComposeFile": "docker-compose.devcontainer.yaml",
+	"service": "devcontainer",
+	"features": {
+		"ghcr.io/devcontainers/features/docker-outside-of-docker:1": {
+			"moby": true,
+			"installDockerBuildx": true,
+			"installDockerComposeSwitch": true,
+			"version": "latest",
+			"dockerDashComposeVersion": "v2"
+		},
+		"ghcr.io/devcontainers/features/go:1": {
+			"version": "1.23"
+		}
+	},
+	"workspaceFolder": "/workspaces",
+	"postCreateCommand": "sudo chown -R vscode:vscode /workspaces/volume && ( [ -d /workspaces/volume/sqyrrl ] || git clone https://github.com/wtsi-npg/sqyrrl.git /workspaces/volume/sqyrrl ) && cd /workspaces/volume/sqyrrl && make test"
+
+	// Features to add to the dev container. More info: https://containers.dev/features.
+	// "features": {},
+
+	// Use 'forwardPorts' to make a list of ports inside the container available locally.
+	// "forwardPorts": [],
+
+	// Use 'postCreateCommand' to run commands after the container is created.
+	// "postCreateCommand": "uname -a",
+
+	// Configure tool-specific properties.
+	// "customizations": {},
+
+	// Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
+	// "remoteUser": "root"
+}

.devcontainer/docker-compose.devcontainer.yaml

@@ -0,0 +1,29 @@
+
+services:
+    devcontainer:
+      image: "mcr.microsoft.com/devcontainers/base:jammy"
+      #image: "mcr.microsoft.com/devcontainers/go:dev-1.23-bookworm"
+      volumes:
+        - ..:/workspaces/host/sqyrrl:ro,cached
+        # above has all the normal pain of mismatched user:group ids
+        - sqyrrldev:/workspaces/volume:rw
+      network_mode: service:irodsserver
+      command: sleep infinity
+
+    irodsserver:
+      #container_name: irods-server
+      image: "ghcr.io/wtsi-npg/ub-16.04-irods-4.2.7:latest"
+      platform: linux/amd64
+      ports:
+        - "127.0.0.1:1247:1247"
+        - "127.0.0.1:20000-20199:20000-20199"
+      restart: always
+      healthcheck:
+        test: ["CMD", "nc", "-z", "-v", "127.0.0.1", "1247"]
+        start_period: 30s
+        interval: 5s
+        timeout: 10s
+        retries: 12
+
+volumes:
+  sqyrrldev: