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Refine workflow core enhancements#29

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y1zhou wants to merge 34 commits into
mainfrom
perf/workflow-core-enhancements
Draft

Refine workflow core enhancements#29
y1zhou wants to merge 34 commits into
mainfrom
perf/workflow-core-enhancements

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@y1zhou

@y1zhou y1zhou commented Jun 17, 2026

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Summary

  • Fix reviewed PPIFlow workflow issues around staging, artifact checks, and unsupported placeholder outputs
  • Move GROMACS workflow expected-file contracts into the GROMACS app
  • Add regression coverage for PPIFlow and GROMACS workflow contracts

y1zhou added 30 commits June 8, 2026 10:59
When the ledger and existing files differ (e.g. some files of a successful run were
deleted), this commit would help the runtime discover missing files and rerun
corresponding nodes.
…etter defaults

reduce nested shells (inherit stdout and stderr whenever possible); use sys.stdout.write instead of print
@y1zhou y1zhou changed the title Refine workflow core enhancements Refine workflow core enhancements Jun 17, 2026
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