Issue #8 Visualize Intermediate Representations#73

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SreeDan wants to merge 35 commits into

AI2Science:mainfrom

priyavisingh:main

Commits on Mar 13, 2026

adding graphing code from openfold output
Pranav Narala
committed

Commits on Mar 23, 2026

adding in evoformer hook instrumentation and plotting utils

PranavNarala1
authored and
PranavNarala1
committed

Commits on Apr 13, 2026

Create run_evoformer_hook_pretrained_openfold.py
PranavNarala1
authored

Commits on Apr 25, 2026

Add Flask web interface, visualization script, and updated demo notebook for Issue #8
Sruthi Srideeksha Vangavolu
committed

Commits on Apr 27, 2026

Commits on Apr 28, 2026

Merge remote-tracking branch 'origin/main' into prathamheatmap
prathampatel21
committed
Add Evoformer extraction hooks and inspection utilities
Pranav Narala
committed
adding in new cell for testing evoformer hook extraction
Pranav Narala
committed
Merge pull request #1 from PranavNarala1/final-checkin
PranavNarala1
authored
Integrate viz with Priyavi's representation_tensor_utils
prathampatel21
committed
Normalize cell key ordering in viz demo notebook
prathampatel21
committed
Add integration tests for viz <-> representation_tensor_utils bridge
prathampatel21
committed
Wire viz heatmaps into the Flask UI via render_for_ui.py
prathampatel21
committed
Add Evoformer extraction hooks and inspection utilities

Pranav Narala
authored and
Pranav Narala
committed
adding in new cell for testing evoformer hook extraction

Pranav Narala
authored and
Pranav Narala
committed
Merge branch 'PranavNarala1-main'
Pranav Narala
committed
Merge branch 'main' of https://github.com/PranavNarala1/attention-viz-demo
Pranav Narala
committed
Resolve notebook conflict against priyavi main
Pranav Narala
committed
Merge pull request #4 from PranavNarala1/main
PranavNarala1
authored
Merge remote-tracking branch 'origin/main' into prathamheatmap
prathampatel21
committed
Add EvoformerRunArtifact -> Figure bridge
prathampatel21
committed
Merge pull request #5 from priyavisingh/prathamheatmap
prathampatel21
authored
fix(viz): moved web interface into viz folder and added security check
SreeDan
committed
fix: add edge case handling and quality of life improvements
SreeDan
committed
refactor(viz)
SreeDan
committed
feat(viz): added requirements
SreeDan
committed
update readme
SreeDan
committed

Commits on Apr 29, 2026

refactor(viz): moved evoformer inspect to viz folder
SreeDan
committed