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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 476 157

  2. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 147 26

  3. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 144 120

  4. ensembl-rest ensembl-rest Public

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 142 63

  5. ensembl ensembl Public

    The Ensembl Core Perl API and SQL schema

    Perl 80 77

  6. ensembl-pipeline ensembl-pipeline Public

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 62 29

Repositories

Showing 10 of 211 repositories
  • ensembl-webcode Public

    The code to run an Ensembl website

    Ensembl/ensembl-webcode’s past year of commit activity
    Perl 22 Apache-2.0 51 0 0 Updated Apr 5, 2025
  • ensembl-production Public

    Ensembl Production code

    Ensembl/ensembl-production’s past year of commit activity
    Perl 11 Apache-2.0 43 0 9 Updated Apr 4, 2025
  • ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Ensembl/ensembl-compara’s past year of commit activity
    Perl 52 Apache-2.0 69 0 4 Updated Apr 4, 2025
  • ensembl-client Public

    Ensembl beta client

    Ensembl/ensembl-client’s past year of commit activity
    TypeScript 13 Apache-2.0 4 0 2 Updated Apr 4, 2025
  • nextflow_modules Public

    A collection of shared Ensembl modules used in NextFlow pipelines

    Ensembl/nextflow_modules’s past year of commit activity
    Nextflow 3 3 1 3 Updated Apr 4, 2025
  • ensembl-utils Public

    Ensembl python utils

    Ensembl/ensembl-utils’s past year of commit activity
    Python 3 Apache-2.0 3 0 0 Updated Apr 3, 2025
  • ensembl-genomio Public

    Pipelines to turn basic genomic data into Ensembl cores and back

    Ensembl/ensembl-genomio’s past year of commit activity
    Python 9 Apache-2.0 9 0 2 Updated Apr 3, 2025
  • ensembl-py Public

    Python Ensembl code source repository

    Ensembl/ensembl-py’s past year of commit activity
    Python 5 Apache-2.0 11 0 1 Updated Apr 3, 2025
  • ensembl-genes-nf Public

    Ensembl Genebuild NextFlow pipelines

    Ensembl/ensembl-genes-nf’s past year of commit activity
    Nextflow 2 Apache-2.0 5 0 1 Updated Apr 3, 2025
  • ensembl-variation Public

    The Ensembl Variation Perl API and SQL schema

    Ensembl/ensembl-variation’s past year of commit activity
    Perl 28 Apache-2.0 56 0 13 Updated Apr 3, 2025