fixed up comments in warnings. #214
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| name: NHM-Assist continuous integration | |
| on: | |
| # run at 6 AM UTC every day | |
| # this time is checked below for certain actions: change everywhere if you change | |
| schedule: | |
| - cron: '0 6 * * *' | |
| push: | |
| paths-ignore: | |
| - '**.md' | |
| - '.gitignore' | |
| pull_request: | |
| paths-ignore: | |
| - '**.md' | |
| - '.gitignore' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| # lint: | |
| # name: Lint | |
| # runs-on: ubuntu-latest | |
| # defaults: | |
| # run: | |
| # shell: bash | |
| # steps: | |
| # - name: Checkout repo | |
| # uses: actions/checkout@v4 | |
| # - name: Setup python | |
| # uses: actions/setup-python@v5 | |
| # with: | |
| # python-version: '3.10' | |
| # - name: Install ruff | |
| # run: pip install ruff | |
| # - name: Lint | |
| # run: ruff check . | |
| # - name: Check format | |
| # run: ruff format . --check | |
| test: | |
| name: test notebooks | |
| # needs: lint | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["macos-latest", "windows-latest", "ubuntu-latest"] | |
| python-version: ["3.10",] # "3.11"] | |
| defaults: | |
| run: | |
| shell: bash -el {0} | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: environment.yaml | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Cache Wilamette River domain data | |
| id: cache-wilamette | |
| uses: actions/cache@v4 | |
| with: | |
| path: domain_data | |
| enableCrossOsArchive: true | |
| key: willamette_data | |
| - name: Pull Willamette River domain data | |
| if: steps.cache-willamette.outputs.cache-hit != 'true' | |
| run: | | |
| ./pull_domain.py --name=willamette_river | |
| - name: Scheduled - move cache files to test data retrievals | |
| if: github.event.schedule == '0 6 * * *' | |
| working-directory: .github/scripts | |
| run: | | |
| python mv_cache_files_for_scheduled_tests.py | |
| # Osx and Linux start with nearly the same speed, Windows is slower. | |
| - name: Scheduled - delay Linux to not hit ORDWR servers simultaneously | |
| if: ${{ (github.event.schedule == '0 6 * * *') && (runner.os == 'Linux') }} | |
| run: | | |
| python -c "import time; time.sleep(210)" | |
| - name: Test notebooks | |
| working-directory: .github/scripts | |
| run: | | |
| python test_notebooks.py | |
| - name: Remove test output files from cache | |
| working-directory: .github/scripts | |
| run: | | |
| python rm_test_output_files_from_cache.py --name=willamette_river | |
| - name: Scheduled - restore cache files after scheduled tests | |
| if: github.event.schedule == '0 6 * * *' | |
| working-directory: .github/scripts | |
| run: | | |
| python restore_cache_files_after_scheduled_tests.py |