Videos on YouTube

During COVID-19, all my lectures were moved online. This gave me the impetus to explore this medium. Hence, I thought that since I am already doing it, why not put my contents on YouTube? As such, this page is a listing of all my videos on my YouTube channel. I am learning how to be comfortable as I go along and all these videos are mostly live recordings with no rehearsals nor editing; hence, I do apologize for some of my Freudian slips (also known as "slip of tongue").

Nevertheless, please subscribe...

Video Series: 10-Minutes Python

10-Minutes Python video series is a project to deliver bite-size Python training and education to the masses. My aim is to cap each video at 10 minutes maximum so that it can be digested easily. All the videos will be posted at my 10-Minutes Python YouTube Channel. Here is the list of videos so far:

1. Launch and Self-Introduction: June 22, 2020; 3:07 minutes
2. Numbers (Integer and Float) vs Strings: June 22, 2020; 5:08 minutes
3. Setting up Python Environment (Anaconda and Spyder): June 23, 2020; 4:11 minutes
4. Variable Names: June 23, 2020; 5.46 minutes
5. Arithmetic Operators: June 23, 2020; 4:46 minutes
6. Logical (Comparison) Operators: June 23, 2020; 5:39 minutes
7. Comments: June 23, 2020; 4:47 minutes
8. Importance of Indentations: June 23, 2020; 5:09 minutes
9. Simple IF Statement: July 20, 2020; 6:03 minutes
10. Multiple IF Statements: July 20, 2020; 6:16 minutes

Video Series: Simulations

1. Using Artificial Life Simulation to Gain Insights into Contradictory Field Evidence - Talk presented at PyConSG 2016 in June 2016.
2. Digital Organism for Evolutionary Insights - Talk given at National Supercomputing Centre Singapore on May 25, 2018; organized by Association for Medical and Bioinformatics Singapore (AMBIS)
3. How to run a DOSE simulation
4. ZeroOne 1 - Starting "Matrix" Simulator Project
5. ZeroOne 2 - Running the "Matrix"
6. Generating Simulatable Kinetic Models from Genome-Scale Models
7. ChemBot_1 vs DumbBot

Video Series: Using Zotero

1. Setup Zotero and Connect to Microsoft Word
2. Insert Citations into Zotero Using PubMed ID and DOI
3. Insert Citations into Zotero Using RIS File
4. Insert Citations into Zotero Using PDF
5. Manually Insert Citations into Zotero
6. Using Zotero in Microsoft Word including (a) How to add in-line citations, (b) How to change in-line citation styles, (c) How to generate reference list, and (d) How to get new citation styles.
7. Extract Zotero References from Microsoft Word for Import into Another Zotero Library using Reference Extractor by Rintze Zelle. Here is the corresponding GitHub repository.

Video Series: Bioinformatics

1. Bachelor, Applied Bioinformatics, Lecture 1: Genome-Scale Analysis 1
2. Bachelor, Applied Bioinformatics, Laboratory 1: Identifying Tumour Subtypes
3. Bachelor, Applied Bioinformatics, Lecture 2: Genome-Scale Analysis 2
4. Bachelor, Applied Bioinformatics, Laboratory 2: Identifying Differentially Expressed Genes
5. Bachelor, Applied Bioinformatics, Lecture 3: Machine Learning Classification of Tumour Subtypes
6. Bachelor, Applied Bioinformatics, Laboratory 3: Support Vector Machine to Classify Microarray Data into Tumour Subtypes
7. Diploma, Scripting in Bioinformatics, Lecture 1A: Briefing and Primitives
8. Diploma, Scripting in Bioinformatics, Lecture 1B: Primitives
9. Diploma, Scripting in Bioinformatics, Lecture 2: Collections
10. Diploma, Scripting in Bioinformatics, Lecture 3: Control Statements
11. Diploma, Scripting in Bioinformatics, Lecture 4: User Defined Functions
12. Diploma, Scripting in Bioinformatics, Lecture 5: Modules, Packages and Reading Files
13. Diploma, Scripting in Bioinformatics, Lecture 6: Introduction to Biopython
14. Diploma, Scripting in Bioinformatics, Lecture 7: Sequence Annotation Objects
15. Diploma, Scripting in Bioinformatics, Lecture 8: Sequence Input/Output
16. Diploma, Scripting in Bioinformatics, Lecture 9: BLAST
17. Diploma, Bioinformatics, Lecture 1: Introduction to Bioinformatics (Molecular Tools, Part 1)
18. Diploma, Bioinformatics, Lecture 2: Introduction to Bioinformatics (Molecular Tools, Part 2; and Databases)
19. Diploma, Bioinformatics, Lecture 3: NCBI Databases and BLAST
20. Diploma, Bioinformatics, Lecture 4: Sequence Comparison
21. Tutorial: How to Download Genomic Sequences from GenBank
22. Diploma, Bioinformatics, Lecture 5: Protein Families and Domains
23. Diploma, Bioinformatics, Lecture 6: Phylogenetics
24. Diploma, Bioinformatics, Lecture 7: Genome Annotation & Comparative Genomics
25. Bachelor, Genomics, Lecture 1: Genome Structure
26. Bachelor, Genomics, Lecture 2: Genome Assembly
27. Bachelor, Genomics, Lecture 3: Microarrays and Molecular Subgrouping
28. Bachelor, Genomics, Lecture 4: Differentially Expressed Genes
29. Bachelor, Genomics, Lecture 5: Classifiers and Machine Learning
30. Bachelor, Genomics, Lecture 6: microRNAs
31. Bachelor, Genomics, Lecture 7: Epigenetics
32. Bachelor, Genomics, Lecture 8: CRISPR-Cas Based Genome Editing and Applications
33. Bachelor, Genomics, Lecture 9: Microbial / Fungal / Viral Communities
34. Bachelor, Genomics, Lecture 10: Prediction of Protein Structure & Function from Sequence

Video Series: Statistics

1. Concept: Statistics and Analysis (Part 1 of 2)
2. Concept: Statistics and Analysis (Part 2 of 2)
3. Excel: How to get Data Analysis and Solver tabs in Excel
4. Excel: Descriptive Statistics with Excel
5. Excel: 1-sample Z-test / t-test with Excel
6. Excel: 3 Types of t-tests (paired, and 2-samples with equal or unequal variances) with Excel
7. Excel: One-way ANOVA with Excel
8. Excel: Summarize data using Pivot Tables in Excel
9. Excel: Using Excel's Pivot Table to Calculate Relative Risk and Odds Ratio
10. Excel: VLookup function in Excel
11. Concept: Statistics Revision for Microbiology, 1st Edition
12. Concept: Statistics Revision for Microbiology, 2nd Edition
13. Excel: Simple Linear Regression in Excel
14. Excel: Multiple Regression in Excel
15. Concept: Use Only Frequencies in Chi-Square Test
16. Excel: Using Excel to Test for Conformity to Distribution
17. Diploma, Biological Data Analysis, Tutorial 1: Data Type & Summary Statistics
18. Diploma, Biological Data Analysis, Laboratory 1: Data Type & Summary Statistics
19. Diploma, Biological Data Analysis, Lecture 2: Basic Research Strategies and Contingency Table
20. Diploma, Biological Data Analysis, Tutorial 2: Research Strategies & Contingency Table
21. Diploma, Biological Data Analysis, Laboratory 2: Research Strategies & Contingency Table
22. Diploma, Biological Data Analysis, Lecture 3: Basic Probability Theories, Relative Risk and Odds Ratio
23. Diploma, Biological Data Analysis, Tutorial 3: Basic Probability Theories, Relative Risk and Odds Ratio
24. Diploma, Biological Data Analysis, Tutorial 3: Basic Probability Theories, Relative Risk and Odds Ratio, 2nd Edition
25. Diploma, Biological Data Analysis, Tutorial 3: Basic Probability Theories, Relative Risk and Odds Ratio, 3rd Edition
26. Diploma, Biological Data Analysis, Tutorial 3: Basic Probability Theories, Relative Risk and Odds Ratio, 4th Edition
27. Diploma, Biological Data Analysis, Laboratory 3: Binomial and Normal Distribution using Excel
28. Diploma, Biological Data Analysis, Laboratory 3: Binomial and Normal Distribution using Excel, 2nd Edition
29. Diploma, Biological Data Analysis, Laboratory 3: Binomial and Normal Distribution using Excel, 3rd Edition
30. Diploma, Biological Data Analysis, Tutorial 4: Probability Distribution
31. Diploma, Biological Data Analysis, Tutorial 4: Probability Distribution, 2nd Edition
32. Diploma, Biological Data Analysis, Tutorial 4: Probability Distribution, 3rd Edition
33. Diploma, Biological Data Analysis, Tutorial 4: Probability Distribution, 4th Edition
34. Diploma, Biological Data Analysis, Laboratory 4: One Sample Hypothesis Testing
35. Diploma, Biological Data Analysis, Laboratory 4: One Sample Hypothesis Testing, 2nd Edition
36. Diploma, Biological Data Analysis, Laboratory 4: One Sample Hypothesis Testing, 3rd Edition
37. Diploma, Biological Data Analysis, Tutorial 5: One Sample Hypothesis Testing
38. Diploma, Biological Data Analysis, Tutorial 5: One Sample Hypothesis Testing, 2nd Edition
39. Diploma, Biological Data Analysis, Tutorial 5: One Sample Hypothesis Testing, 3rd Edition
40. Diploma, Biological Data Analysis, Tutorial 5: One Sample Hypothesis Testing, 4th Edition
41. Diploma, Biological Data Analysis, Laboratory 5: Two Sample Hypothesis Testing
42. Diploma, Biological Data Analysis, Tutorial 6: Two Sample Hypothesis Testing
43. Diploma, Biological Data Analysis, Tutorial 6: Two Sample Hypothesis Testing, 2nd Edition
44. Diploma, Biological Data Analysis, Tutorial 6: Two Sample Hypothesis Testing, 3rd Edition
45. Diploma, Biological Data Analysis, Tutorial 6: Two Sample Hypothesis Testing, 4th Edition
46. Diploma, Biological Data Analysis, Tutorial 7: Confidence Interval
47. Diploma, Biological Data Analysis, Tutorial 7: Confidence Interval, 2nd Edition
48. Diploma, Biological Data Analysis, Tutorial 7: Confidence Interval, 3rd Edition
49. Diploma, Biological Data Analysis, Laboratory 7: Introduction to R
50. Diploma, Biological Data Analysis, Tutorial 8: ANOVA
51. Diploma, Biological Data Analysis, Tutorial 8: ANOVA, 2nd Edition
52. Diploma, Biological Data Analysis, Laboratory 8: ANOVA
53. Diploma, Biological Data Analysis, Laboratory 8: ANOVA, 2nd Edition
54. Diploma, Biological Data Analysis, Tutorial 9: Regression
55. Diploma, Biological Data Analysis, Tutorial 9: Regression, 2nd Edition
56. Diploma, Biological Data Analysis, Tutorial 9: Regression, 3rd Edition
57. Diploma, Biological Data Analysis, Laboratory 9: Regression
58. Diploma, Biological Data Analysis, Laboratory 9: Regression, 2nd Edition
59. Diploma, Biological Data Analysis, Laboratory 9: Regression, 3rd Edition
60. Diploma, Biological Data Analysis, Lecture 10: Wilcoxon Rank-Sum Test and Wilcoxon Signed-Sum Test
61. Diploma, Biological Data Analysis, Tutorial 10: Wilcoxon Rank-Sum Test and Wilcoxon Signed-Rank Test
62. Diploma, Biological Data Analysis, Tutorial 10: Wilcoxon Rank-Sum Test and Wilcoxon Signed-Rank Test, 2nd Edition
63. Diploma, Biological Data Analysis, Tutorial 10: Wilcoxon Rank-Sum Test and Wilcoxon Signed-Rank Test, 3rd Edition
64. Diploma, Biological Data Analysis, Laboratory 10: Wilcoxon Rank-Sum Test and Wilcoxon Signed-Rank Test
65. Diploma, Biological Data Analysis, Tutorial 11: Chi-Square Test
66. Diploma, Biological Data Analysis, Tutorial 11: Chi-Square Test, 2nd Edition
67. Diploma, Biological Data Analysis, Laboratory 11: Chi-Square Test and Fisher's Exact Test
68. Diploma, Biological Data Analysis, Laboratory 11: Chi-Square Test and Fisher's Exact Test, 2nd Edition
69. Diploma, Biological Data Analysis, Laboratory 11: Chi-Square Test and Fisher's Exact Test, 3rd Edition
70. Excel: Are 2 Regression Coefficients Significantly Different?
71. Diploma, Statistics for Applied Sciences, Lecture 3: Probabilities and Distributions
72. Concept: ANOVA is regression
73. Concept: Relationship Between Standard Deviation and Regression
74. Excel: Common Statistical Methods Using Excel
75. Diploma, Statistics for Applied Sciences, Topic 1: Present the Distribution of a Given Set of Data in Various Ways
76. Diploma, Statistics for Applied Sciences, Topic 2: Determine Whether a Given Data Set is Normally Distributed
77. Diploma, Statistics for Applied Sciences, Topic 3: Solve Problems Using Linear Regression Method
78. Diploma, Statistics for Applied Sciences, Topic 4: Apply the Appropriate Parametric Tests on Normally Distributed Data Sets
79. Diploma, Statistics for Applied Sciences, Topic 5: Apply the Appropriate Nonparametric Tests on Non-Normally Distributed Data Sets
80. Diploma, Statistics for Applied Sciences, Topic 6: Perform the Goodness-of-Fit Test to Appropriate Scenarios
81. Diploma, Statistics for Applied Sciences, Topic 7: Apply Randomization Methods to Appropriate Scenarios
82. Statistics with R: 1. Introducing the Dataset
83. Statistics with R: 2. Reading Excel Spreadsheet into R
84. Statistics with R: 3. Adding Computed Columns
85. Statistics with R: 4. Descriptive Statistics
86. Statistics with R: 5. Shapiro-Wilk Test for Normality
87. Statistics with R: 6. Fligner-Killeen Test for Homogeneity of Variances
88. Statistics with R: 7. t-tests for 2-Sample Means
89. Statistics with R: 8. Mann Whitney U Test
90. Statistics with R: 9. Wilcoxon Signed-Rank Test
91. Statistics with R: 10. Subsetting Data
92. Statistics with R: 11. Simple Linear Regression
93. Statistics with R: 12. Multiple Linear Regression
94. Statistics with R: 13. 1-Way ANOVA for N-Sample Means
95. Statistics with R: 14. 2-Way ANOVA for N-Sample Means
96. Statistics with R: 15. N-Way ANOVA for M-Sample Means
97. Statistics with R: [Kruskal-Wallis Test]

Video Series: Science Related

1. Bachelors, Practical Skills, Lecture 1: Scientific Communication (Part 1 of 2)
2. Bachelors, Practical Skills, Lecture 2: Scientific Communication (Part 2 of 2)
3. Bachelors, Practical Skills, Lecture 3: Scientific Writing
4. Bachelors, Practical Skills, Lecture 4: Scientific Posters
5. Bachelors, Practical Skills, Lecture 5: Research Ethics
6. Introduction to Molecular Tools in Biotechnology (Part 1 of 3)
7. Introduction to Molecular Tools in Biotechnology (Part 2 of 3)
8. Introduction to Molecular Tools in Biotechnology (Part 3 of 3)
9. Essential IT Skills for Biology Students
10. Investigative Biotechnology Laboratory Demonstration
11. Diploma, Physics I, Lecture 1: Physical Units
12. Diploma, Physics I, Lecture 2: Structure of Matter
13. Diploma, Physics I, Lecture 3: Electricity
14. Diploma, Physics I, Lecture 4: Waves and Sound
15. Diploma, Physics I, Lecture 5: Light
16. Diploma, Physics II, Lecture 1: Motion
17. Diploma, Physics II, Lecture 2: Forces and Energy
18. Diploma, Physics II, Lecture 3: Pressure, Density & Elasticity
19. Diploma, Physics II, Lecture 4: Heat and Conduction
20. Diploma, Physics II, Lecture 4 (2nd edition): Heat and Conduction
21. Diploma, Physics II, Lecture 5: Magnetism
22. Diploma, Physics II, Lecture 5 (2nd edition): Magnetism
23. Bachelors, Introductory Pathological Science, Lecture 1: Legal Framework for Biomedical Scientist
24. Bachelors, Introductory Pathological Science, Lecture 2: Clinical Biochemistry Samples and Sample Processing
25. Bachelors, Introductory Pathological Science, Lecture 3: Automation in Pathology
26. Bachelors, Introductory Pathological Science, Lecture 4: Introduction to Clinical Chemistry
27. Bachelors, Introductory Pathological Science, Lecture 5: Integrated Clinical Chemistry
28. Bachelors, Introductory Pathological Science, Lecture 6: Lipids and Cardiovascular Disorders
29. Bachelors, Introductory Pathological Science, Lecture 7: Medical Microbiology (Principles of Diagnostics)
30. Bachelors, Introductory Pathological Science, Lecture 8: Renal Function
31. Bachelors, Introductory Pathological Science, Lecture 9: Urine Analysis
32. Bachelors, Introductory Pathological Science, Lecture 10: Renal Clearance
33. Bachelors, Introductory Pathological Science, Lecture 11: Glucose Control and Clinical Derangements
34. Bachelors, Introductory Pathological Science, Lecture 12: Medical Microbiology (Principles of Diagnostics)
35. Bachelors, Introductory Pathological Science, Lecture 13: Art of Culture
36. Bachelors, Introductory Pathological Science, Lecture 14: Practice of Clinical Microbiology
37. Bachelors, Introductory Pathological Science, Lecture 15: Introductory and Innate Immunology
38. Bachelors, Introductory Pathological Science, Lecture 16: Complement System
39. Bachelors, Introductory Pathological Science, Lecture 17: B Lymphocytes & Antibodies
40. Bachelors, Introductory Pathological Science, Lecture 18: Major Histocompatibility Complex and Antigen Presentation
41. Bachelors, Introductory Pathological Science, Lecture 19: T Lymphocytes & Molecular Mediators of Immunity
42. Bachelors, Introductory Pathological Science, Lecture 20: Organs of the Immune System
43. Bachelors, Introductory Pathological Science, Lecture 21: Transplantation
44. Bachelors, Introductory Pathological Science, Lecture 22: Introduction to Cellular Pathology
45. Bachelors, Introductory Pathological Science, Lecture 23: Tissue Preparation - Fixation and Processing
46. Bachelors, Introductory Pathological Science, Lecture 24: Staining
47. Bachelors, Introductory Pathological Science, Lecture 25: Epithelial Tissue
48. Bachelors, Introductory Pathological Science, Lecture 26: Connective Tissue
49. Bachelors, Introductory Pathological Science, Lecture 27: Muscle Tissue
50. Bachelors, Introductory Pathological Science, Lecture 28: Nerve Tissue
51. Bachelors, Introductory Pathological Science, Lecture 29: Immunocytochemistry and Immunofluorescence
52. Bachelors, Introductory Pathological Science, Lecture 30: Introduction to Haematology
53. Bachelors, Introductory Pathological Science, Lecture 31: Introduction to Blood Transfusion
54. Bachelors, Introductory Pathological Science, Lecture 32: Rhesus Blood Group
55. Bachelors, Introductory Pathological Science, Lecture 33: Clotting
56. Bachelors, Introductory Pathological Science, Lecture 34: Introduction to Blood Transfusion Services
57. Bachelors, Introductory Pathological Science, Lecture 35: White Blood Cells and WBC Disorders
58. Masters, Research Approaches, Methods and Skills, Session 1: Identifying a Research Problem and Formulating a Research Question
59. Masters, Research Approaches, Methods and Skills, Session 2: Doing Research Part 1: Qualitative Data Collection Methods
60. Masters, Research Approaches, Methods and Skills, Session 3: Doing Research Part 2: Quantitative Data Collection Methods
61. Masters, Research Approaches, Methods and Skills, Session 4: Focus Groups
62. Masters, Research Approaches, Methods and Skills, Session 5: Analyzing Qualitative Data
63. Masters, Research Approaches, Methods and Skills, Session 6: Quantitative Research: Designs, Terminology, Processes, Methods, and Applications
64. Masters, Research Approaches, Methods and Skills, Session 7: Interpretivism
65. Masters, Research Approaches, Methods and Skills, Session 8: Critical Approaches to Research
66. Masters, Research Approaches, Methods and Skills, Session 9: Ethics in Research
67. Masters, Research Approaches, Methods and Skills, Session 10: Analyzing an Interview Transcript
68. Masters, Research Approaches, Methods and Skills, Session 11: Mixed Methods Approaches
69. Masters, Research Approaches, Methods and Skills, Session 12: Exploring Wellbeing Using Interpretivism

Video Series: Laboratory Briefings

1. Bachelors, Practical Skills, Laboratory 1: Pipetting
2. Bachelors, Practical Skills, Laboratory 2: Microscopy
3. Bachelors, Practical Skills, Laboratory 3A: Using Spectrophotometer (Brief Introduction)
4. Bachelors, Practical Skills, Laboratory 3B: Preparing Solutions
5. Bachelors, Practical Skills, Laboratory 4: pH and Buffers
6. Bachelors, Practical Skills, Laboratory 5: Spectrophotometry
7. Bachelors, Practical Skills, Laboratory 6: Sterile Technique (Part 1 of 2)
8. Bachelors, Practical Skills, Laboratory 7: Sterile Technique (Part 2 of 2)
9. Bachelors, Practical Skills, Laboratory 8: Dilution and Colourimetry
10. Bachelors, Practical Skills, Laboratory 9: Quantitative Microbiology 1
11. Bachelors, Practical Skills, Laboratory 10: Quantitative Microbiology 2
12. Bachelors, Practical Skills, Laboratory 11: Laboratory Investigation 1
13. Bachelors, Introductory Pathological Science, Laboratory 1: Glucose Determination by Enzymatic Method
14. Bachelors, Introductory Pathological Science, Laboratory 2: Glucose Determination / Oral Glucose Tolerance Test
15. Bachelors, Introductory Pathological Science, Laboratory 3: Plasma Creatinine and e-GFR
16. Bachelors, Introductory Pathological Science, Laboratory 4: Medical Microbiology 1 of 4: Inoculation into Selective Media
17. Bachelors, Introductory Pathological Science, Laboratory 5: Medical Microbiology 2 of 4: Steak Dilution
18. Bachelors, Introductory Pathological Science, Laboratory 6: Medical Microbiology 3 of 4: Basic Biochemical Tests
19. Bachelors, Introductory Pathological Science, Laboratory 7: Medical Microbiology 4 of 4: Staphylococcus Identification
20. Bachelors, Introductory Pathological Science, Laboratory 8: Haemagglutination
21. Bachelors, Introductory Pathological Science, Laboratory 9: Histological Drawing
22. Bachelors, Introductory Pathological Science, Laboratory 10: Staining - Haematoxylin and Eosin
23. Bachelors, Introductory Pathological Science, Laboratory 11: Staining - PAS, Amylase
24. Bachelors, Introductory Pathological Science, Laboratory 12: Staining - Martius Scarlet Blue
25. Bachelors, Introductory Pathological Science, Laboratory 13: Making & Staining of Blood Films
26. Bachelors, Introductory Pathological Science, Laboratory 14: ABO and Rh Grouping & Antibody Identification

Miscellaneous Videos

1. My PhD convocation
2. Membrane transport pathways that regulate β-amyloid precursor protein (APP) processing and β-amyloid (Aβ) production in Alzheimer’s disease - Dr. Anson Tan: Public Seminar at IMCB, Singapore; on 3rd September 2019.
3. Creating a encrypted compressed folder using 7-zip